Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq459 145 7e-30
seq8041 120 3e-22
seq3552 118 1e-21
seq4088 111 2e-19
seq1720 93.3 4e-14
>seq459
Length=3563100
Score = 145 bits (160), Expect = 7e-30
Identities = 153/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || |||||||| | ||| | | | || || ||||||||||
Sbjct 2214088 GGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 2214030
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||||| ||||||||| ||||||||||||||||| || |||||| ||
Sbjct 2214029 CTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCT 2213970
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | |||||| | |||||||| || | ||||| ||| ||||||||||| |
Sbjct 2213969 TCACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 2213910
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 2213909 TCTTCACGAAGATCTGCAT 2213891
Score = 145 bits (160), Expect = 7e-30
Identities = 153/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||||||||| || |||||||| | ||| | | | || || ||||||||||
Sbjct 2214316 GGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 2214258
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||||| ||||||||| ||||||||||| ||||| || |||||| ||
Sbjct 2214257 CTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCT 2214198
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| |
Sbjct 2214197 TCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 2214138
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 2214137 TCTTCACGAAGATCTGCAT 2214119
Score = 131 bits (144), Expect = 2e-25
Identities = 150/199 (75%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || |||||||| | ||| | | | || || ||||||||||
Sbjct 2213860 GGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 2213802
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||||| ||||||||| ||||||||||| ||||| || |||||| ||
Sbjct 2213801 CTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCT 2213742
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| |||||||||| || | ||||| ||| ||||| |||| |
Sbjct 2213741 TCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGG 2213682
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 2213681 TCTTCACGAAGATCTGCAT 2213663
>seq8041
Length=9355897
Score = 120 bits (132), Expect = 3e-22
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||||||||| || ||||| || || ||| | || || ||||| || ||
Sbjct 8399000 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCC 8399059
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | || ||||||||| || |||||||| |||||||| |||||| |||
Sbjct 8399060 GGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTT 8399119
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | ||||| |||||||||| || | ||||| ||| || || |||| ||
Sbjct 8399120 GACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGT 8399179
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 8399180 CTTCACGAAGATCTGCATG 8399198
Score = 120 bits (132), Expect = 3e-22
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||||||||| || ||||| || || ||| | || || ||||| || ||
Sbjct 8399228 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCC 8399287
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | || ||||||||| || |||||||| |||||||| |||||| |||
Sbjct 8399288 GGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTT 8399347
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | ||||| |||||||||| || | ||||| ||| || || |||| ||
Sbjct 8399348 GACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGT 8399407
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 8399408 CTTCACGAAGATCTGCATG 8399426
Score = 120 bits (132), Expect = 3e-22
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||||||||| || ||||| || || ||| | || || ||||| || ||
Sbjct 8399456 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCC 8399515
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | || ||||||||| || |||||||| |||||||| |||||| |||
Sbjct 8399516 GGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTT 8399575
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | ||||| |||||||||| || | ||||| ||| || || |||| ||
Sbjct 8399576 GACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGT 8399635
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 8399636 CTTCACGAAGATCTGCATG 8399654
Score = 120 bits (132), Expect = 3e-22
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||||||||| || ||||| || || ||| | || || ||||| || ||
Sbjct 8399684 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCC 8399743
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | || ||||||||| || |||||||| |||||||| |||||| |||
Sbjct 8399744 GGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTT 8399803
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | ||||| |||||||||| || | ||||| ||| || || |||| ||
Sbjct 8399804 GACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGT 8399863
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 8399864 CTTCACGAAGATCTGCATG 8399882
>seq3552
Length=199577
Score = 118 bits (130), Expect = 1e-21
Identities = 154/208 (74%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||||||||| |||||||| || ||| ||| | ||||| ||
Sbjct 80760 AAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGATGGAGTGCGACCA-TCCTCCAG 80818
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| |||| ||| |||| || |||||||||| || |||||||| |||||||| |||
Sbjct 80819 CTGTTTGCTCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGAT 80878
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || |||| | |||| ||||| ||||||| || || | ||||| ||| ||||
Sbjct 80879 -TTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGC 80937
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| |||| || || || || | ||||||
Sbjct 80938 CCATCAGGGTCTTCACAAAGACCTGCAT 80965
>seq4088
Length=12000580
Score = 111 bits (122), Expect = 2e-19
Identities = 152/207 (73%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 133456 AATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGC 133514
|||| | ||||||||||||||| | || |||||| || || | | | ||||| |||
Sbjct 9606412 AATGCAAGGTGGACTCTTTCTGAACATCGTAATCTGACAGAGTACGGCCA-TCCTCCAGC 9606470
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| || |||| | |||| || |||||||||| || |||||||| |||||||| |||
Sbjct 9606471 TGTTTCCCCGTGAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTAGAT- 9606529
Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
| | || |||| | || | ||||| |||| ||| || |||| ||||| || |||||
Sbjct 9606530 TGTAGCTTTGACATTCTTATTGGTGTCAGTGGACTCAACCTCGAGGGTGATAGTCTTGCC 9606589
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || || || ||||| ||
Sbjct 9606590 TGTCAGGGTCTTCACAAAGATCTGTAT 9606616
>seq1720
Length=6396105
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || ||||| | ||||||| || | || ||||||||||| || |||||||| ||||||
Sbjct 3282229 TCATCCAGCTGTTCGCCCGCGAAACTCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 3282288
Query 133566 TCGGTGATCTTTTGCT-TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
|| |||| ||| ||| ||| | |||| ||||| |||||| || |||| |||||
Sbjct 3282289 TCTTTGAT-TTTAGCTCTGACATTCTCAGTGGTGTCACAGGGCTCAACCTCGAGGGTGAG 3282347
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTG 133657
||| ||||| |||| | || || || | |||
Sbjct 3282348 GGTCTTGCCCATCAGGCTCTTCACAAAGACCTG 3282380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483206553944200
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