Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq8041 102 5e-17
>seq8041
Length=9355897
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | ||| | |||| || || ||| |||||| || |||||||| || ||
Sbjct 8398971 CCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 8399030
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| ||||| |||||||| ||||| | |||||| ||| | ||
Sbjct 8399031 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 8399090
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || ||| || | | | || | |||||| || | |||||
Sbjct 8399091 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCCAC 8399149
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || ||||| || || || || || |||||||||||
Sbjct 8399150 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399197
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | ||| | |||| || || ||| |||||| || |||||||| || ||
Sbjct 8399199 CCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 8399258
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| ||||| |||||||| ||||| | |||||| ||| | ||
Sbjct 8399259 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 8399318
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || ||| || | | | || | |||||| || | |||||
Sbjct 8399319 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCCAC 8399377
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || ||||| || || || || || |||||||||||
Sbjct 8399378 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399425
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | ||| | |||| || || ||| |||||| || |||||||| || ||
Sbjct 8399427 CCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 8399486
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| ||||| |||||||| ||||| | |||||| ||| | ||
Sbjct 8399487 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 8399546
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || ||| || | | | || | |||||| || | |||||
Sbjct 8399547 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCCAC 8399605
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || ||||| || || || || || |||||||||||
Sbjct 8399606 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399653
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | ||| | |||| || || ||| |||||| || |||||||| || ||
Sbjct 8399655 CCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 8399714
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| ||||| |||||||| ||||| | |||||| ||| | ||
Sbjct 8399715 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 8399774
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || ||| || | | | || | |||||| || | |||||
Sbjct 8399775 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCCAC 8399833
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || ||||| || || || || || |||||||||||
Sbjct 8399834 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399881
Score = 98.7 bits (108), Expect = 7e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | ||| | |||| || || ||| ||| || || |||||||| || ||
Sbjct 8398743 CCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 8398802
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| ||||| |||||||| ||||| | |||||| ||| | ||
Sbjct 8398803 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 8398862
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || ||| || | | | || | |||||| || | |||||
Sbjct 8398863 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCCAC 8398921
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || ||||| || || || || || |||||||||||
Sbjct 8398922 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398969
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
|||| || || || || | ||||| || |||||| || || || |||||||| || |
Sbjct 8398513 CACCTCCCCTTAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAG 8398572
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| | || |||| ||||| || ||||| ||||| | |||||| ||| | |
Sbjct 8398573 ACAGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGG 8398632
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || || ||||| || ||| || | | | || | |||||| || | |||
Sbjct 8398633 GGATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCC 8398691
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| || ||||| || || || || || |||||||||||
Sbjct 8398692 ACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328561964433600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |