Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq8041 84.2 2e-11
seq4475 82.4 7e-11
>seq8041
Length=9355897
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| || | | | |||||||| || ||||||||||| || ||| ||| |
Sbjct 8398983 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 8399042
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| |||||||| |||| | |||| | | ||| || ||||| || ||||| || ||
Sbjct 8399043 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 8399102
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || || | | || | || || | |||||||| || | || |
Sbjct 8399103 TCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 8399162
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| ||||| |||| || || | ||| |||||||||
Sbjct 8399163 GTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399198
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| || | | | |||||||| || ||||||||||| || ||| ||| |
Sbjct 8399211 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 8399270
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| |||||||| |||| | |||| | | ||| || ||||| || ||||| || ||
Sbjct 8399271 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 8399330
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || || | | || | || || | |||||||| || | || |
Sbjct 8399331 TCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 8399390
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| ||||| |||| || || | ||| |||||||||
Sbjct 8399391 GTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399426
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| || | | | |||||||| || ||||||||||| || ||| ||| |
Sbjct 8399439 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 8399498
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| |||||||| |||| | |||| | | ||| || ||||| || ||||| || ||
Sbjct 8399499 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 8399558
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || || | | || | || || | |||||||| || | || |
Sbjct 8399559 TCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 8399618
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| ||||| |||| || || | ||| |||||||||
Sbjct 8399619 GTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399654
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| || | | | |||||||| || ||||||||||| || ||| ||| |
Sbjct 8399667 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 8399726
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| |||||||| |||| | |||| | | ||| || ||||| || ||||| || ||
Sbjct 8399727 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 8399786
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || || | | || | || || | |||||||| || | || |
Sbjct 8399787 TCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 8399846
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| ||||| |||| || || | ||| |||||||||
Sbjct 8399847 GTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399882
>seq4475
Length=11054148
Score = 82.4 bits (90), Expect = 7e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 47196 AATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAA 47255
||||| ||||| |||||| | |||||||| | ||||| ||||| ||||| || ||||||
Sbjct 3059107 AATCCCTTTGATTTTATGGAAAACATTTCTTTAGAGGGGAAAACAAATTTCTTTGAGAAA 3059048
Query 47256 CGAGTCGGAGAGTATAAGCGCTT 47278
||||| ||||||| |||||||
Sbjct 3059047 CGAGTTTCAGAGTATCAGCGCTT 3059025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476399971873800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |