Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 329 4e-85
seq8309 293 3e-74
seq5010 185 1e-41
seq6177 172 6e-38
seq1720 127 2e-24
seq7234 105 8e-18
seq5524 86.0 7e-12
>seq1473
Length=14027634
Score = 329 bits (364), Expect = 4e-85
Identities = 501/705 (71%), Gaps = 9/705 (1%)
Strand=Plus/Plus
Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931
|| |||||||| ||||| || | || | | | ||||| |||||||| ||||| |
Sbjct 9372551 ATTTTGAGCTTCGGGAAAGGCCTTGGTTCTCGCGGAAGCTGCATTTTCAGTGGCTCAGTG 9372610
Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991
|| || ||||| | ||| || || |||| ||||| |||| ||| || ||||| |||||
Sbjct 9372611 TGATTCAGGTAAATGTGTGCATCTCCCAAAGTGTGTACAAGGTCACCTGGCTTCAGGCCT 9372670
Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051
|| | ||| || | ||||||||||||||| ||||||||||| ||||||||||| || |||
Sbjct 9372671 GTGATGTGTGCAATCATGTAGGTGAGCAGAGAGTAGCTGGCGATGTTGAAGGGCACGCCC 9372730
Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAA 147111
||||||||||| || |||| || ||||||||||| || ||||| |||| |||||||
Sbjct 9372731 AGGCCCATGTCTCCTGACCGCTCATACAGCTGGCAGGACAGCTCACCGTTCACCACGTAG 9372790
Query 147112 AACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG-GCGGGCAGGTCCGCGGGGTTCCA 147170
|||||||| ||| ||||| || || || ||| || ||||| |||| || |||||
Sbjct 9372791 AACTGGCAAAGGGCATGGCAGGGTGGGAGGGCCGTGAGCGGG-AGGTGTTTTGGATTCCA 9372849
Query 147171 GGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCT 147230
||| | | | | | ||| | ||||| | || || || | ||| |
Sbjct 9372850 GGCACACATGATGATTCTTCTGTCATTAGGGTTGGTTTTGATTGTGTCAGTCACCTTCTG 9372909
Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTG-TCCCGCAGTCCACGTACCTGGCCCCAA 147289
||| ||||| || || | ||| || | || ||| | || |||| ||||||||
Sbjct 9372910 CAGTTGGTCTACTCCTTTGCCTGAATAATCTGAATCCGTA-TCTTCGTATTCGGCCCCAA 9372968
Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349
| ||||||||||| |||| ||| ||||| || || || || | |||| ||||| |
Sbjct 9372969 AATGCCTCCACTGAAAGCGGTATACTGGGCCTAGATCTCC---TTCTCTGGTGGAGAATC 9373025
Query 147350 CC-GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCG 147408
|| | | | ||| | | ||||||| |||||||||||| |||||||||||
Sbjct 9373026 CCAGGCTGTCCAAGACGC-CTCGGGACCCACTGGCGTCCCAGATTTTCACTCCCTTGGAA 9373084
Query 147409 GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCC 147468
|| |||||||||| || ||||| ||| ||| ||||| |||| ||||||||||| |||
Sbjct 9373085 GACAGCTCCTTAGCGTTTGTGGATCCCTTGATAAACCACAGCAATTCCTCCAAAACACCC 9373144
Query 147469 CTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGTCCCTCAGCGAATACCTCGCC 147528
|||| || || | ||||| || ||||| || || | || || || || | ||||
Sbjct 9373145 TTCCAGAAAACACGTTTGGTTGTGAGCAGTGGAAATTCATCTCTGAGGCTGTAGCGCGCC 9373204
Query 147529 TGGTCCCCAAACACAGACAGCGTGCCCGTGCCCGTCCTGTCCTCC 147573
|| || ||||| ||||| ||||| |||||||| | ||| |||
Sbjct 9373205 TGCATGCCGAACACCGACAGGGTGCCGGTGCCCGTGCGGTCGTCC 9373249
>seq8309
Length=14478951
Score = 293 bits (324), Expect = 3e-74
Identities = 257/320 (80%), Gaps = 0/320 (0%)
Strand=Plus/Plus
Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131
|||||||||||||||| || | || ||||||||| || ||||| | | ||||| |||
Sbjct 4494907 GTGGTGACCCAGGATGTAAGAGAGCCGCTGAACACACCTGCCTCTTTAAGCTGCTCTCTG 4494966
Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191
|| | | | || || || ||||||| || ||||| ||||||||| | | || ||
Sbjct 4494967 CAAAATCCCCAAGAAGTCTTGATTGTGACATGGCAAAAAATCAAGGCTGTAAGCCCGGAA 4495026
Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251
|||||||| || || ||| | |||| ||||| || |||||||| || ||||||||||||
Sbjct 4495027 AACATGATCACCTTCAGCGAGAACCATGGGGTTGTAGTCCAGCCTGCCTATAAGGACAAG 4495086
Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311
|||||||||||||| || |||||| ||||||||||| || || ||||||||||||||
Sbjct 4495087 ATAAACATCACCCAACTGGGACTCATGAACTCAACCATTACCTTCTGGAATACCACCTTG 4495146
Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371
||||| |||||||| ||||| |||||||| || |||||||| |||||||| ||||| ||
Sbjct 4495147 GAGGATGAGGGGTGTTACAAGTGCCTCTTCAATACCTTTGGTTCTGGGAAGATCTCAGGA 4495206
Query 171372 GTGGCCTGCCTCACCCTCTC 171391
|| |||||||||||||||||
Sbjct 4495207 GTAGCCTGCCTCACCCTCTC 4495226
Score = 212 bits (234), Expect = 7e-50
Identities = 216/282 (77%), Gaps = 0/282 (0%)
Strand=Plus/Plus
Query 171388 TCTCNGTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCA 171447
|| | || |||||||| || || || || || ||||| | ||| |||||||| || ||||
Sbjct 4497556 TCCCAGTACAGCCCACAGTTTTCCTTCACTACAAATTCTCTGAAGACCACCTAAATATCA 4497615
Query 171448 CCTGTTCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAA 171507
| || ||||||||||| ||||| | ||| ||| | |||||| | || ||||| | |
Sbjct 4497616 CTTGCTCTGCCAATGCTCGCCCAGCCCCTGTGATCTCCTGGAAGGTCTCTGGGTCGGGGA 4497675
Query 171508 TTGAAAACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTAC 171567
|||| ||||||| ||| |||| || || | ||||| || || ||||| ||||| | |
Sbjct 4497676 TTGAGAACAGTACTGAGATTCTCTCACACCCCAATGGGACAACATCTGTCACCAGCATCC 4497735
Query 171568 TCCAAGTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACC 171627
|||| || |||||||||||||||||| |||| |||||||| |||||||| ||| | |||
Sbjct 4497736 TCCAGGTCAAAGACCCCAAGAGTCAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGTACC 4497795
Query 171628 TGGGAAATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669
|||| | ||| || |||| |||||||| || | ||| ||||
Sbjct 4497796 TGGGGACTGTGACCAACTACAGGGAAACGGTGAACAAAGGTA 4497837
>seq5010
Length=10235142
Score = 185 bits (204), Expect = 1e-41
Identities = 145/172 (84%), Gaps = 1/172 (1%)
Strand=Plus/Minus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| ||||| || | ||| || | ||||||||||||||| ||||||||||| ||||||||
Sbjct 3047453 CTTCAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAA 3047394
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
||| || |||||||||||||| ||||||| ||||||||||||||| || ||||| ||||
Sbjct 3047393 GGGCACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTT 3047334
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG-GCGGG 147152
||||||| |||||||| ||| |||||| ||||| || |||||| |||||
Sbjct 3047333 CACCACGTAGAACTGGCAAAGGGCGTGGCAGGGCGGGAGGGCCATGAGCGGG 3047282
Score = 93.3 bits (102), Expect = 5e-14
Identities = 117/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341
||||||||| |||||||| || |||||||| || || || || || || | ||||
Sbjct 3044204 GGCCCCAAAATGCCTCCATTGAAAGCCGTAAACCGGGCCTAGATCTCCTTCTTCTCTGGT 3044145
Query 147342 CGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401
||||| ||| | | | || || ||||||| | |||||||||||| ||||||
Sbjct 3044144 GGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTGGCGTCCCAGATTTTCACTCC 3044085
Query 147402 CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442
||||| || |||||||||| || ||||| ||| ||| ||
Sbjct 3044084 CTTGGAAGACAGCTCCTTAGCGTTTGTGGATCCCTGGAGGA 3044044
>seq6177
Length=1774859
Score = 172 bits (190), Expect = 6e-38
Identities = 137/167 (82%), Gaps = 12/167 (7%)
Strand=Plus/Plus
Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290
|||||||| |||||||||| |||||||| |||||||| ||||||||| ||||||||||||
Sbjct 656564 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGA 656623
Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350
|||| ||||| ||||| ||| ||||| ||||| ||||||||||| ||||
Sbjct 656624 TGCCACAGGCGGAGAACCAC------------GGCCCTGACATCAAGGAGCATGTGAACT 656671
Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397
| |||||||| ||||| |||||||| ||| |||||||||| || |||
Sbjct 656672 CCCTGGGGGAGAAGCTGAAGACCCTCAGACTGAGGCTGCGTCGCTGT 656718
Score = 98.7 bits (108), Expect = 1e-15
Identities = 74/87 (85%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521
|||| ||||| ||||| || |||||||| ||||||||||| || || ||||| |||||||
Sbjct 658825 AGCTCCAAGAGAAGGGGGTCTACAAAGCCATGAGTGAGTTCGACATCTTTATCAACTACA 658884
Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548
||||||| |||||||||| || ||||
Sbjct 658885 TAGAAGCCTACATGACAATGAAGATGA 658911
Score = 84.2 bits (92), Expect = 3e-11
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 178173 CAAATGAAGGACCAGCTGGACAACATGTTGTTAAATGGGTCCCTGCTGGAAGACTTTAAG 178232
||||||||||||||||||||||||||| |||| | ||||||||||||| |||||||||
Sbjct 656264 CAAATGAAGGACCAGCTGGACAACATGCTGTTGACCAGGTCCCTGCTGGAGGACTTTAAG 656323
Query 178233 G 178233
|
Sbjct 656324 G 656324
>seq1720
Length=6396105
Score = 127 bits (140), Expect = 2e-24
Identities = 123/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
|||||| ||||| ||| | |||| || |||||||| ||| ||| ||||||| |||||
Sbjct 6382682 GTACTCCCTGGTATTTGTCATTGGCCTGATTGGCAACATCCTAGTGGTCCTAGTTCTCAT 6382623
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
| |||||||||||||| | |||||||| ||||| ||| ||||||||||| || |||
Sbjct 6382622 GCAATACAAGAGGCTCAGAAGCATGACCAGCATCTACCTCCTCAACCTGGCCATTTCTGA 6382563
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767
|||| | | | ||||| || ||||| |||||| |||
Sbjct 6382562 CCTGATCTTCCTCTTCACACTGCCCTTCTGGATTGACT 6382525
>seq7234
Length=282933
Score = 105 bits (116), Expect = 8e-18
Identities = 118/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
|||||| ||||||| | |||| || | ||||| | ||||| | | |||| |
Sbjct 32713 GTACTCCTTGGTGTTCGGGGTTGGCCTGCTGGGCAACGTGGTGGTGCTGATGATCCTTAC 32772
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
||| |||||||||||| |||||||||||||||| |||| ||||||||||| || |||
Sbjct 32773 AAAATACAAGAGGCTCCACATCATGACCAACATCTACCTGCTCAACCTGGCCGTTTCTGA 32832
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767
|||||| | | |||| || || || ||||||||||
Sbjct 32833 CCTGCTTGTCCTGCTCACGCTGCCGTTCTGGATTCACT 32870
>seq5524
Length=12672740
Score = 86.0 bits (94), Expect = 7e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670
||||| |||| ||| ||||||| || |||| ||| | ||||| | || || || |
Sbjct 3858975 TACTCCTTGGTCTTTCTGTTTGGCCTGCTTGGAAATTCTGTGGTGGTTCTGGTTCTGTTC 3859034
Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730
||||||||| |||||| | ||||||| || | | |||| ||||||||||| | |||
Sbjct 3859035 AAGTACAAGCGGCTCAAGTCCATGACCGACGTGTACCTGCTCAACCTGGCCATCTCGGAC 3859094
Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760
||||| | | || | |||||||| |||
Sbjct 3859095 CTGCTCTTCGTGCTCTCGCTCCCCTTCTGG 3859124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583229405412000
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