Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq8041 131 2e-25
seq459 123 2e-23
>seq8041
Length=9355897
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 8398778 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAA 8398837
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 8398838 GATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 8398897
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 8398898 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCAC 8398957
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 8398958 GAAGATCTGCAT 8398969
Score = 129 bits (142), Expect = 5e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 8398551 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAG 8398610
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 8398611 ATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTC 8398670
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 8398671 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACG 8398730
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 8398731 AAGATCTGCAT 8398741
Score = 125 bits (138), Expect = 6e-24
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 8399006 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAA 8399065
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 8399066 GATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 8399125
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 8399126 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCAC 8399185
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 8399186 GAAGATCTGCAT 8399197
Score = 125 bits (138), Expect = 6e-24
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 8399234 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAA 8399293
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 8399294 GATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 8399353
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 8399354 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCAC 8399413
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 8399414 GAAGATCTGCAT 8399425
Score = 125 bits (138), Expect = 6e-24
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 8399462 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAA 8399521
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 8399522 GATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 8399581
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 8399582 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCAC 8399641
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 8399642 GAAGATCTGCAT 8399653
Score = 125 bits (138), Expect = 6e-24
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 8399690 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAA 8399749
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 8399750 GATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 8399809
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 8399810 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCAC 8399869
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 8399870 GAAGATCTGCAT 8399881
>seq459
Length=3563100
Score = 123 bits (136), Expect = 2e-23
Identities = 145/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||| | | || || | || ||||||||||| || || ||
Sbjct 2213854 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAA 2213795
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | ||| | || |||||| ||| |||||| ||||| | |
Sbjct 2213794 GATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 2213735
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || || |||||||| || |||||
Sbjct 2213734 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCAC 2213675
Query 35725 AAATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 2213674 GAAGATCTGCATTTTG 2213659
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||| | | || || | || ||||||||||| || || ||
Sbjct 2214082 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAA 2214023
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | ||| | || ||||| ||| |||||| ||||| |
Sbjct 2214022 GATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 2213963
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | |||||||||| ||||| || || || |||| || |||||
Sbjct 2213962 CTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 2213903
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 2213902 GAAGATCTGCAT 2213891
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || || | || ||||||||||| || || ||
Sbjct 2214310 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAA 2214251
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | ||| | || |||||| ||| |||||| ||||| | |
Sbjct 2214250 GATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 2214191
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || || || |||| || |||||
Sbjct 2214190 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 2214131
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 2214130 GAAGATCTGCAT 2214119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450593813911400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |