Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq3785 129 8e-25
>seq3785
Length=24937548
Score = 129 bits (142), Expect = 8e-25
Identities = 584/919 (64%), Gaps = 19/919 (2%)
Strand=Plus/Plus
Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742
||||||| |||||||| || || || || || ||| | || ||||| ||||| ||| ||
Sbjct 6510058 GAAGAGGCAGAGTTTCCAATAGCATATTCTATAGTGGTTCATCACAAAATCGAAATGCTC 6510117
Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802
|| | ||||||||||||||||| || ||||| |||||||| | |||||||||
Sbjct 6510118 GACAGGCTCCTGAGGGCCATCTATATGCCTCAGAATTTCTACTGCATTCACGTGGACAAA 6510177
Query 13803 AAGTCCGGCGACGAGTTCATCCGGG--GC-GTCTCGGCCATCGCCAGGTGCTTCCCTAAC 13859
|| || ||| || | | | || || || | ||| || || ||| ||||
Sbjct 6510178 AAATC---CGAGGAATCCTTTTTGGCTGCAGTGATTGGCATTGCGTCTTGTTTCAGTAAC 6510234
Query 13860 GTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCC 13919
|| ||||| | ||| | |||||||| | ||| ||||| || || |||||
Sbjct 6510235 GTTTTTGTGGCCAGGCAACTGGAGAGTGTGGTGTATGCCTCGTGGAGCCGGGTTCAGGCT 6510294
Query 13920 GACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAAC 13979
||| ||| ||||||| |||||| || | | |||| |||| || ||||
Sbjct 6510295 GACATCAACTGCATGCAGGACCTCTACAAAATGAGTGCGGACTGGAAGTACTTGATCAAT 6510354
Query 13980 CTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCC 14039
|| ||||| ||||| || ||| | || ||||||||||| || || || ||| ||| |
Sbjct 6510355 CTCTGCGGTATGGATTTTCCGATTAAAACCAACCTGGAAATTGTCAGGAAGCTCAAGTCG 6510414
Query 14040 CTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAGCTGCACCGCATC 14099
| ||| ||||| ||| || | |||| |||||| ||| || | |
Sbjct 6510415 TTAATGGGCGAGAACAACCTAGAAACCGAGAAAATGCCCGCCCATAA---AAAAGAAAGG 6510471
Query 14100 AGGAAGAGGCACGTGGTGGCCAGCGG----CGGCGTGGTGGTCAACACCGGCAGGAACAA 14155
|||| | |||| | ||| || || | || |||| || | ||||
Sbjct 6510472 TGGAAAAAGCAC----TATACAGTGGTTAATGGAAAGCTGACAAACATGGGGACTGACAA 6510527
Query 14156 GGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCACCCG 14215
| || || || | || | ||| | || | ||| || |||| ||||| |
Sbjct 6510528 AATACATCCTCCTCTTGAAACGCCGCTGTTTTCAGGCAGCGCCTATTTTGTGGTCAGTAG 6510587
Query 14216 GGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCACTGGTTCGA 14275
| ||| |||| || || || || | || | | | ||| | ||| |
Sbjct 6510588 GAAGTATGTGGGCTATGTGCTTGAGAATGAAAAAATCCAGAAGTTTATGGAGTGGGCAAA 6510647
Query 14276 GGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCC 14335
|| || |||||||| |||||| | || |||||||| | ||||| ||| | | | ||
Sbjct 6510648 AGATACATACAGCCCAGACGAGTATCTCTGGGCCACTATTCAGAGGATG-CCTGAAGTCC 6510706
Query 14336 CGGGGGGATCCCCGTTCACGTC-AAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGT 14394
| || | | || | || |||||||||| || |||||| | | | |||||
Sbjct 6510707 CAGGCTCACTGTCCTTAAGTTCTAAGTACGACATGTCAGACATGCACTCTATTGCCAGGT 6510766
Query 14395 TCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCG 14454
| || |||||||| |||| || || || | || || |||| |||||||| |||
Sbjct 6510767 TTGTTAAGTGGCAGTACTTTGAAGGTGACGTTTCCAAGGGCGCCCCCTACCCGCCGTGCA 6510826
Query 14455 ACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAAGA 14514
|||||||||||| | | | | || | ||||| |||| ||| |||| ||| || |
Sbjct 6510827 GCGGCATCCACGTGCGCTCTGTATGTGTTTTCGGAGCCGGTGACTTGAACTGGATGCTGC 6510886
Query 14515 GCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGAGTTCGCCGTGCGCT 14574
||| | |||||||| ||||| ||||| ||| || | ||| || ||| | | |
Sbjct 6510887 ACGTGCACCACCTGTTTGCCAATAAGTTTGACACAGACATAGACTTCTTTGCCATCCAGT 6510946
Query 14575 GTCTGGACGAGGACGTGCG 14593
|| |||||||| | ||||
Sbjct 6510947 GTTTGGACGAGCATCTGCG 6510965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658447255020800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |