Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23] 35,455 sequences; 1,992,663,268 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq8041 129 4e-25 >seq8041 Length=9355897 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| ||||||| |||| || || ||| |||||| || ||||| || || || Sbjct 8398742 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 8398801 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || || Sbjct 8398802 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 8398861 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| |||| || | || ||| | || ||||| | ||||| Sbjct 8398862 GATGCCCTCCTTGTCTTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 8398920 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || ||||| || || || ||||| || ||||||||| Sbjct 8398921 CCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8398970 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| ||||||| |||| || || ||| ||| || || ||||| || || || Sbjct 8398970 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 8399029 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || || Sbjct 8399030 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 8399089 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| |||| || | || ||| | || ||||| | ||||| Sbjct 8399090 GATGCCCTCCTTGTCTTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 8399148 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || ||||| || || || ||||| || ||||||||| Sbjct 8399149 CCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399198 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| ||||||| |||| || || ||| ||| || || ||||| || || || Sbjct 8399198 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 8399257 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || || Sbjct 8399258 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 8399317 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| |||| || | || ||| | || ||||| | ||||| Sbjct 8399318 GATGCCCTCCTTGTCTTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 8399376 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || ||||| || || || ||||| || ||||||||| Sbjct 8399377 CCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399426 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| ||||||| |||| || || ||| ||| || || ||||| || || || Sbjct 8399426 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 8399485 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || || Sbjct 8399486 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 8399545 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| |||| || | || ||| | || ||||| | ||||| Sbjct 8399546 GATGCCCTCCTTGTCTTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 8399604 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || ||||| || || || ||||| || ||||||||| Sbjct 8399605 CCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399654 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| ||||||| |||| || || ||| ||| || || ||||| || || || Sbjct 8399654 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 8399713 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || || Sbjct 8399714 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 8399773 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| |||| || | || ||| | || ||||| | ||||| Sbjct 8399774 GATGCCCTCCTTGTCTTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 8399832 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || ||||| || || || ||||| || ||||||||| Sbjct 8399833 CCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399882 Score = 114 bits (126), Expect = 8e-21 Identities = 161/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 34487 TAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTC 34546 |||| |||| ||||| || |||||| ||||| || ||||| || || || || || | Sbjct 8398523 TAAG-CGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGC 8398581 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 || | ||||| || ||||| || ||||| || || | ||| ||||| || || | |||| Sbjct 8398582 GCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCT 8398641 Query 34607 CCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACG 34665 |||||||| |||| || | || ||| | || ||||| | |||||| |||| | Sbjct 8398642 CCTTGTCTTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGG 8398700 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| || || || ||||| || ||||||||| Sbjct 8398701 GTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8398742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314593602881015