Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq459 122 8e-23
>seq459
Length=3563100
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||||||||||| | || || || || ||||| || |
Sbjct 2213891 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCTAGC 2213950
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || || || || || |||||||| || || || ||
Sbjct 2213951 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 2214010
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| ||||| || ||||||| | || |||| |||||||||
Sbjct 2214011 CAGAGGCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 2214070
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||| ||||| || ||||||| ||
Sbjct 2214071 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGGGGTGGTAT 2214120
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||||||||||| | || || || || ||||| ||
Sbjct 2214119 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 2214178
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || || || || || || ||||| || || || ||
Sbjct 2214179 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAG 2214238
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| ||||| || ||||||| | || |||| |||||||||
Sbjct 2214239 CAGAGGCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 2214298
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || || ||||||||| | || |||| | ||| || ||||||||
Sbjct 2214299 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 2214346
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||| |||||| | || || || || ||||| ||
Sbjct 2213663 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 2213722
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || || || || || || ||||| || || || ||
Sbjct 2213723 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAG 2213782
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| ||||| || ||||||| | || |||| |||||||||
Sbjct 2213783 CAGAGGCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 2213842
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||| ||||| || ||||||| ||
Sbjct 2213843 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGGGGTGGTAT 2213892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434725649601600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |