Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 410 1e-109
seq5010 165 7e-36
seq2093 129 5e-25
>seq1473
Length=14027634
Score = 410 bits (454), Expect = 1e-109
Identities = 555/771 (72%), Gaps = 3/771 (0%)
Strand=Plus/Plus
Query 6487 TCGAATAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCG 6546
||||| |||||||||| ||||| || | || ||||| | ||||| || || |
Sbjct 9372544 TCGAAGCATTTTGAGCTTCGGGAAAGGCCTTGGTTCTCGCGGAAGCTGCATTTTCAGTGG 9372603
Query 6547 CTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAAC 6606
||| |||| |||||||| || || ||||| ||||| || || || || || || ||
Sbjct 9372604 CTCAGTGTGATTCAGGTAAATGTGTGCATCTCCCAAAGTGTGTACAAGGTCACCTGGCTT 9372663
Query 6607 CAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGG 6666
|| || || || || |||||||| |||||||||| ||| || || |||||||| ||
Sbjct 9372664 CAGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAGAGAGTAGCTGGCGATGTTGAAGGG 9372723
Query 6667 CACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGC 6726
||| || | ||||||||||| || || | ||| ||||||||||||||||| || ||| |
Sbjct 9372724 CACGCCCAGGCCCATGTCTCCTGACCGCTCATACAGCTGGCAGGACAGCTCACCGTTCAC 9372783
Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
|||||||| ||||| |||| ||||| || ||||| ||| | || ||||| | || ||
Sbjct 9372784 CACGTAGAACTGGCAAAGGGCATGGCAGGGTGGGAGGGCCGTGAGCGGGAGGTGTTTTGG 9372843
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
||||| || ||||| | ||| |||||||||| |||||| || | ||||| ||||
Sbjct 9372844 ATTCCAGGCACACATGATGATTCTTCTGTCATTAGGGTTGGTTTTGATTGTGTCAGTCAC 9372903
Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGC 6906
| |||||| ||||| |||| | || ||||| || | || | | || || ||
Sbjct 9372904 CTTCTGCAGTTGGTCTACTCCTTTGCCTGAATAATCTGAATCCGTATCTTCGTATTCGGC 9372963
Query 6907 CCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGG 6966
|||||| || |||||||| || | ||| || ||||| | || ||| ||| | | |
Sbjct 9372964 CCCAAAATGCCTCCACTGAAAGCGGTATACTGGGCCTAGATC-TCCTTCTCTGGTG--GA 9373020
Query 6967 GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCG 7026
||| ||| | |||||| | | |||| ||||| ||||||||||| ||||| |||
Sbjct 9373021 GAATCCCAGGCTGTCCAAGACGCCTCGGGACCCACTGGCGTCCCAGATTTTCACTCCCTT 9373080
Query 7027 GGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCAC 7086
||| || |||||||| | ||| |||| ||| | | |||||||||| ||||| | ||
Sbjct 9373081 GGAAGACAGCTCCTTAGCGTTTGTGGATCCCTTGATAAACCACAGCAATTCCTCCAAAAC 9373140
Query 7087 GCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTCGCCCCGAAGGTTGTATCG 7146
||||||||| | |||||||| || || ||||| |||||||| | | ||| |||| ||
Sbjct 9373141 ACCCTTCCAGAAAACACGTTTGGTTGTGAGCAGTGGAAATTCATCTCTGAGGCTGTAGCG 9373200
Query 7147 GGCCTGTGTGCCGAACACGGAGAGGGTCCCCGTCCCGGTCCGGTCCCCCTTCCGGTAGCC 7206
||||| |||||||||| || ||||| || || || || ||||| |||||||| ||||
Sbjct 9373201 CGCCTGCATGCCGAACACCGACAGGGTGCCGGTGCCCGTGCGGTCGTCCTTCCGGGAGCC 9373260
Query 7207 CTCCCTGAGGATCCGCGCCACCTGATACAGATACTGCCACTCCCCATGCGG 7257
| |||||| | | ||| || |||||| |||||| |||||
Sbjct 9373261 GCAGCGGAGGATGTACTTAATCTGCCCCAAGTACTGCAGCTCCCCGTGCGG 9373311
Score = 410 bits (454), Expect = 1e-109
Identities = 555/771 (72%), Gaps = 3/771 (0%)
Strand=Plus/Minus
Query 34088 CCGCATGGGGAGTGGCAGTATCTGTATCAGGTGGCGCGGATCCTCAGGGAGGGCTACCGG 34147
||||| |||||| |||||| || ||| | | |||||| | |||| ||||
Sbjct 9373311 CCGCACGGGGAGCTGCAGTACTTGGGGCAGATTAAGTACATCCTCCGCTGCGGCTCCCGG 9373252
Query 34148 AAGGGGGACCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACAGGCCCGATACAAC 34207
|||| ||||| || || || || ||||| || |||||||||| ||||| || |||| |
Sbjct 9373251 AAGGACGACCGCACGGGCACCGGCACCCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGC 9373192
Query 34208 CTTCGGGGCGAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAG 34267
|| | | |||||||| ||||| || || |||||||| | ||||||||| || | |||
Sbjct 9373191 CTCAGAGATGAATTTCCACTGCTCACAACCAAACGTGTTTTCTGGAAGGGTGTTTTGGAG 9373132
Query 34268 GAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTG 34327
|| |||||||||| | | ||| |||| ||| | |||||||| || ||| ||| |||
Sbjct 9373131 GAATTGCTGTGGTTTATCAAGGGATCCACAAACGCTAAGGAGCTGTCTTCCAAGGGAGTG 9373072
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387
|| ||||||||||| ||||| |||| | | |||||| | ||| ||| | | |
Sbjct 9373071 AAAATCTGGGACGCCAGTGGGTCCCGAGGCGTCTTGGACAGCCTGGGATTCTC--CACCA 9373014
Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447
||| ||| || | ||||| || ||| | || |||||||| || |||||||| || ||
Sbjct 9373013 GAGAAGGA-GATCTAGGCCCAGTATACCGCTTTCAGTGGAGGCATTTTGGGGCCGAATAC 9372955
Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGAC 34507
| | || | || ||||| || | |||| ||||| |||||| | |||| |||
Sbjct 9372954 GAAGATACGGATTCAGATTATTCAGGCAAAGGAGTAGACCAACTGCAGAAGGTGACTGAC 9372895
Query 34508 ACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGAT 34567
|| | || |||||| |||||||||| ||| | ||||| || ||||| || || |
Sbjct 9372894 ACAATCAAAACCAACCCTAATGACAGAAGAATCATCATGTGTGCCTGGAATCCAAAACAC 9372835
Query 34568 CTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGG 34627
||||| || | ||| ||||| || ||||| |||| ||||| |||||||| | ||| ||
Sbjct 9372834 CTCCCGCTCACGGCCCTCCCACCCTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACGGT 9372775
Query 34628 GAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAAC 34687
||||||||||||||||| ||| | || || ||||||||||| | || ||||| ||||||
Sbjct 9372774 GAGCTGTCCTGCCAGCTGTATGAGCGGTCAGGAGACATGGGCCTGGGCGTGCCCTTCAAC 9372715
Query 34688 ATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGG 34747
|| || || ||| |||||||||| |||||||| || || || || || || ||
Sbjct 9372714 ATCGCCAGCTACTCTCTGCTCACCTACATGATTGCACACATCACAGGCCTGAAGCCAGGT 9372655
Query 34748 GAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGG 34807
|| || || || || ||||| ||||| || || |||||||| |||| |||| ||
Sbjct 9372654 GACCTTGTACACACTTTGGGAGATGCACACATTTACCTGAATCACACTGAGCCACTGAAA 9372595
Query 34808 ATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGA 34858
|| ||||| | ||||| || | || ||||| |||||||||| |||||
Sbjct 9372594 ATGCAGCTTCCGCGAGAACCAAGGCCTTTCCCGAAGCTCAAAATGCTTCGA 9372544
>seq5010
Length=10235142
Score = 165 bits (182), Expect = 7e-36
Identities = 133/161 (83%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
|||||||| || ||||| ||||| || |||||| |||| ||||| |||||||| | |||
Sbjct 3047277 GATCTCCCGCTCATGGCCCTCCCGCCCTGCCACGCCCTTTGCCAGTTCTACGTGGTGAAC 3047336
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||||||||||||||| || || || |||||||||||||| | || ||||| |||
Sbjct 3047337 GGTGAGCTGTCCTGCCAGCTGTACCAGCGGTCGGGAGACATGGGCCTGGGCGTGCCCTTC 3047396
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || ||| | |||||||| ||||||||||| ||
Sbjct 3047397 AACATCGCCAGCTACTCCCTGCTCACCTACATGATCGCACA 3047437
Score = 165 bits (182), Expect = 7e-36
Identities = 133/161 (83%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| ||||||||||| |||||||| | ||| || || |||||||| ||||| || | |||
Sbjct 3047437 TGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCC 3047378
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
||||||||||| || || || ||||||||||||||||| || ||| | |||||||| |||
Sbjct 3047377 ATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 3047318
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|| |||| |||||| || ||||| ||||| || ||||||||
Sbjct 3047317 CAAAGGGCGTGGCAGGGCGGGAGGGCCATGAGCGGGAGATC 3047277
Score = 102 bits (112), Expect = 7e-17
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352
|||| ||| | |||||||| || ||| ||| ||||| ||||||||||| | ||||| |
Sbjct 3044056 CCACAAACGCTAAGGAGCTGTCTTCCAAGGGAGTGAAAATCTGGGACGCCAATGGGTCCC 3044115
Query 34353 GAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCT 34412
||||||| |||||| | ||| ||| | | | || || || || | |||||||| |
Sbjct 3044116 GAGACTTCTTGGACAGCCTGGGATTCTCCACCAGAGAAGAAGGAGATCTAGGCCCGGTTT 3044175
Query 34413 ACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
|||| || || ||||| || |||||||| || ||
Sbjct 3044176 ACGGCTTTCAATGGAGGCATTTTGGGGCCGAATA 3044209
Score = 102 bits (112), Expect = 7e-17
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || |||||||| || ||||| || || ||||| |||||||| | || || || ||
Sbjct 3044209 TATTCGGCCCCAAAATGCCTCCATTGAAAGCCGTAAACCGGGCCTAGATCTCCTTCTTCT 3044150
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | | ||| ||| | |||||| |||||||| ||||| | ||||||||||| |||
Sbjct 3044149 CTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTGGCGTCCCAGATTTTC 3044090
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052
|| ||| ||| || |||||||| | ||| ||||
Sbjct 3044089 ACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGG 3044056
>seq2093
Length=2641275
Score = 129 bits (142), Expect = 5e-25
Identities = 335/513 (65%), Gaps = 37/513 (7%)
Strand=Plus/Plus
Query 6653 GCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGAC 6712
|| |||||||| ||||| || | ||| ||| ||| || | || | ||| ||||||||
Sbjct 1091079 GCGATGTTGAAGGGCACACCCAGGCCCCTGTGTCCAGACCAGTGGCACAGCCGGCAGGAC 1091138
Query 6713 AGCTCCCCATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGA 6772
||||| || | ||||| ||||| |||| |||| ||||||||| |||| |||
Sbjct 1091139 AGCTCACC-------TCCTAGAACTGGCAAAGGGCATGGCCCGGGGGGAGGGCCAGGAGA 1091191
Query 6773 GGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTC 6832
|| ||||| || || ||||| || |||| | ||| |||||||| ||| |||| ||
Sbjct 1091192 GGAAGATCTTTGGGATTCCAAGCACACAGGATGATTCTTCTGTCGTCAAGGTTGGTTTTG 1091251
Query 6833 AAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAA-TAGTCCGCTTCGCT 6891
| |||| ||| | ||| ||||| ||||||| |||||| || || | || |
Sbjct 1091252 ATCATGTCAGCCACCGTTTACAGTTGGTCTACTCCCTGACCCGAATTAATCTGAATCCAT 1091311
Query 6892 CCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951
| || || | || || || |||| || || ||||| || || ||
Sbjct 1091312 ATCTTCGTATTCGGATCCCAAATGCCTCC-----------TACACTGGGCCTAAATC-CC 1091359
Query 6952 CTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCA 7011
|| |||| | | ||| ||| | |||| |||||||| ||||| | || |||||
Sbjct 1091360 CT--TCCCTGGTGGAGAATCCCAGGCTGTCGGAGAAGTCTCGGGACCCATTGGCATCCCA 1091417
Query 7012 GATCTTCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAG 7071
||| || ||||||| |||| ||| | | | ||||||||
Sbjct 1091418 ---------------GGAAGACAGCTCCTCAATGTTTGTGAATTTCGTGATAAACCACAG 1091462
Query 7072 CAGCTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTCGCC 7131
|| |||||| || | |||||| | ||||||| || |||| ||| ||||| || |
Sbjct 1091463 CAACTCCTCCCAAACACTTTTCCAGAAACCACGTTTGGTTGTCACCAGGGGAAACTCATC 1091522
Query 7132 CCGAAGGTTGTATCGGGCCTGTGTGCCGAACAC 7164
| ||| |||| || ||||| |||| ||||||
Sbjct 1091523 TCTCAGGCTGTAGCGCGCCTGCGTGCGGAACAC 1091555
Score = 129 bits (142), Expect = 5e-25
Identities = 335/513 (65%), Gaps = 37/513 (7%)
Strand=Plus/Minus
Query 34181 GTGTTCGGCACACAGGCCCGATACAACCTTCGGGGCGAATTTCCGCTGCTGACGACGAAA 34240
|||||| |||| ||||| || |||| ||| | | || ||||| ||| |||| || |||
Sbjct 1091555 GTGTTCCGCACGCAGGCGCGCTACAGCCTGAGAGATGAGTTTCCCCTGGTGACAACCAAA 1091496
Query 34241 CGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAAC 34300
|||| | |||||| | || |||||| |||||||||| | | | ||| |||
Sbjct 1091495 CGTGGTTTCTGGAAAAGTGTTTGGGAGGAGTTGCTGTGGTTTATCACGAAATTCACAAAC 1091436
Query 34301 ACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTT 34360
| ||||||| || ||| ||||| || | ||||| ||||||||
Sbjct 1091435 ATTGAGGAGCTGTCTTCC---------------TGGGATGCCAATGGGTCCCGAGACTTC 1091391
Query 34361 CTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTC 34420
|||| | ||| ||| | | |||| |||| || || ||||| || ||
Sbjct 1091390 TCCGACAGCCTGGGATTCTCCACCAGGGA--AGGG-GATTTAGGCCCAGTGTA------- 1091341
Query 34421 CAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCGGACTA-TTCGGGACAGGG 34479
|||| || || || | || || | | || | || || |||||| |||||
Sbjct 1091340 ----GGAGGCATTTGGGATCCGAATACGAAGATATGGATTCAGATTAATTCGGGTCAGGG 1091285
Query 34480 AGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGAT 34539
|| ||||| ||| | ||| |||| | || |||| ||| |||||||| ||
Sbjct 1091284 AGTAGACCAACTGTAAACGGTGGCTGACATGATCAAAACCAACCTTGACGACAGAAGAAT 1091225
Query 34540 CGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACAC 34599
| | |||| || ||||| || || ||||| ||||| |||| ||||||||| |||| |
Sbjct 1091224 CATCCTGTGTGCTTGGAATCCCAAAGATCTTCCTCTCCTGGCCCTCCCCCCGGGCCATGC 1091165
Query 34600 CCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGG 34659
||| ||||| ||||| | || ||||||||||||| ||| | || | || ||
Sbjct 1091164 CCTTTGCCAGTTCTAGGA-------GGTGAGCTGTCCTGCCGGCTGTGCCACTGGTCTGG 1091112
Query 34660 AGACATGGGGTTAGGGGTGCCGTTCAACATTGC 34692
| ||| ||| | || ||||| |||||||| ||
Sbjct 1091111 ACACAGGGGCCTGGGTGTGCCCTTCAACATCGC 1091079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448063735707600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |