Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq459 147 5e-30
seq8041 141 2e-28
seq5766 84.2 5e-11
seq3552 84.2 5e-11
>seq459
Length=3563100
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || || || || || |||| |||||||| | | ||| | |||||
Sbjct 2213875 CAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 2213816
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| || |||||||| || | || ||||| || || || || ||||| ||
Sbjct 2213815 TTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATC 2213756
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||||||| ||||||||||| || ||||| || | ||||| ||
Sbjct 2213755 CTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 2213696
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||||||||||| || || | ||| | ||||||||
Sbjct 2213695 CTTGCCCGTCAAGGTCTTCACGAAGATCTGCATTTT 2213660
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || ||||| |||| |||||||| | | ||| | ||||||
Sbjct 2214330 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 2214271
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || | || ||||| || || || || ||||| ||
Sbjct 2214270 TCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 2214211
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||||||||| || ||||| || | ||||| |||
Sbjct 2214210 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 2214151
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||| || || | ||| | |||||
Sbjct 2214150 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2214119
Score = 127 bits (140), Expect = 5e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || || || || || |||| |||||||| | | ||| | |||||
Sbjct 2214103 CAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 2214044
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| || |||||||| || | || ||||| || || || |||||||| ||
Sbjct 2214043 TTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATC 2213984
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| |||||| ||||||||||| | ||||| || | ||||| ||
Sbjct 2213983 CTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGT 2213924
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| |||| || || | ||| | |||||
Sbjct 2213923 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2213891
>seq8041
Length=9355897
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| | ||| ||||||||||| || |||| ||||| || | || || | ||||||
Sbjct 8398529 CAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8398588
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| |||||||| ||||| | | || ||||| || || || || ||||||||
Sbjct 8398589 TTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8398648
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| || ||||||||||| || ||||| || | ||||| ||
Sbjct 8398649 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8398708
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| |||||||| || || | ||| | |||||
Sbjct 8398709 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398741
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||||| ||||| |||| ||||| || | || || | ||||||
Sbjct 8398985 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399044
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| ||||| || ||||| | | || ||||| || || || || ||||||||
Sbjct 8399045 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399104
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| || ||||||||||| || ||||| || | ||||| ||
Sbjct 8399105 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399164
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| |||||||| || || | ||| | |||||
Sbjct 8399165 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399197
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||||| ||||| |||| ||||| || | || || | ||||||
Sbjct 8399213 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399272
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| ||||| || ||||| | | || ||||| || || || || ||||||||
Sbjct 8399273 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399332
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| || ||||||||||| || ||||| || | ||||| ||
Sbjct 8399333 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399392
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| |||||||| || || | ||| | |||||
Sbjct 8399393 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399425
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||||| ||||| |||| ||||| || | || || | ||||||
Sbjct 8399441 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399500
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| ||||| || ||||| | | || ||||| || || || || ||||||||
Sbjct 8399501 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399560
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| || ||||||||||| || ||||| || | ||||| ||
Sbjct 8399561 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399620
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| |||||||| || || | ||| | |||||
Sbjct 8399621 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399653
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||||| ||||| |||| ||||| || | || || | ||||||
Sbjct 8399669 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399728
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| ||||| || ||||| | | || ||||| || || || || ||||||||
Sbjct 8399729 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399788
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| || ||||||||||| || ||||| || | ||||| ||
Sbjct 8399789 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399848
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| |||||||| || || | ||| | |||||
Sbjct 8399849 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399881
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||||| || || |||| ||||| || | || || | ||||||
Sbjct 8398757 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8398816
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| ||||| || ||||| | | || ||||| || || || || ||||||||
Sbjct 8398817 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8398876
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| || ||||||||||| || ||||| || | ||||| ||
Sbjct 8398877 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8398936
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| |||||||| || || | ||| | |||||
Sbjct 8398937 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398969
>seq5766
Length=15090592
Score = 84.2 bits (92), Expect = 5e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076
||||||| ||||| || || ||| | || || ||| ||||| ||||| |||||||| |
Sbjct 12832021 CACTTCAGTACCTGGCGCCCTACTCCGGGTGCTCTATGGGAGAGTATTTCAGAGATAACG 12832080
Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122
| ||||||||||| |||||||| || || ||| ||||| ||||
Sbjct 12832081 GCAAACATGCTTTGATCATCTATGACGACTTATCCAAACAGGTCAA 12832126
>seq3552
Length=199577
Score = 84.2 bits (92), Expect = 5e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || ||||| ||||| || | |||||| || | ||| | |||||
Sbjct 80754 AGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGATGGAGTGCGACCATCC 80813
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || | || || || || | || ||||| || || || || |||||||||
Sbjct 80814 TCCAGCTGTTTGCTCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 80873
Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||| ||| || || ||| || ||||||| || || || || | ||||| ||
Sbjct 80874 TGGAT-TTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGT 80932
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||| ||| || || | || || |||||
Sbjct 80933 CTTGCCCATCAGGGTCTTCACAAAGACCTGCAT 80965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1191989472205770
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