Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq459 132 1e-25
seq8041 131 4e-25
seq3552 98.7 2e-15
>seq459
Length=3563100
Score = 132 bits (146), Expect = 1e-25
Identities = 165/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | |||||| || || || || |||||||| |||||||||||||| | | |||
Sbjct 2214340 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 2214281
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || || |||||||| |||||||||||||| | | ||| ||
Sbjct 2214280 GCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCC 2214221
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 2214220 CTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACCTC 2214164
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || || ||||||||||||| ||||||
Sbjct 2214163 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2214119
Score = 129 bits (142), Expect = 1e-24
Identities = 160/218 (73%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || || || ||||| || |||||||||||||| | | ||| | ||||||
Sbjct 2213874 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 2213815
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| |||||||||||||| | | ||| || ||||| ||
Sbjct 2213814 TCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 2213755
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| |||| | | |||| ||| ||| || || || || ||
Sbjct 2213754 TGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 2213698
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| |||||||| | ||||||||||||| |||||||||
Sbjct 2213697 GTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATTTT 2213660
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || || || ||||| || |||||||||||||| | | ||| | ||||||
Sbjct 2214102 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 2214043
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| |||||||||||||| | | ||| |||||||| ||
Sbjct 2214042 TCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCC 2213983
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || |||| | | |||| | ||| || || || || || ||
Sbjct 2213982 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTC 2213923
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || || ||||||||||||| ||||||
Sbjct 2213922 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2213891
>seq8041
Length=9355897
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||||| || || || || |||||||| ||||||||||| || | | ||
Sbjct 8398977 CTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 8399036
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||||||| || ||||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 8399037 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCC 8399096
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 8399097 TCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 8399153
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || ||||| | ||||||||||||| ||||||
Sbjct 8399154 AGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399197
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||||| || || || || |||||||| ||||||||||| || | | ||
Sbjct 8399205 CTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 8399264
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||||||| || ||||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 8399265 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCC 8399324
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 8399325 TCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 8399381
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || ||||| | ||||||||||||| ||||||
Sbjct 8399382 AGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399425
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||||| || || || || |||||||| ||||||||||| || | | ||
Sbjct 8399433 CTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 8399492
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||||||| || ||||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 8399493 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCC 8399552
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 8399553 TCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 8399609
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || ||||| | ||||||||||||| ||||||
Sbjct 8399610 AGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399653
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||||| || || || || |||||||| ||||||||||| || | | ||
Sbjct 8399661 CTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 8399720
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||||||| || ||||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 8399721 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCC 8399780
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 8399781 TCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 8399837
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || ||||| | ||||||||||||| ||||||
Sbjct 8399838 AGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399881
Score = 125 bits (138), Expect = 2e-23
Identities = 163/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||||| || || || || ||||| || ||||||||||| || | | ||
Sbjct 8398749 CTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 8398808
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||||||| || ||||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 8398809 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCC 8398868
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 8398869 TCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 8398925
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || ||||| | ||||||||||||| ||||||
Sbjct 8398926 AGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398969
Score = 114 bits (126), Expect = 3e-20
Identities = 155/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | || ||||| || || || ||||||||||| || | | || | |||||||
Sbjct 8398530 AGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 8398589
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || |||||| || ||||| | |||||||||||| | | ||| || ||||| |||
Sbjct 8398590 TCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 8398649
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || ||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 8398650 TGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 8398706
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| | ||||||||||||| ||||||
Sbjct 8398707 GTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398741
>seq3552
Length=199577
Score = 98.7 bits (108), Expect = 2e-15
Identities = 150/211 (71%), Gaps = 7/211 (3%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || |||||||| || || ||||| || | | ||| | ||||| || |
Sbjct 80759 CAAG-TGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGATGGAGTGCGACCATCCTCCA 80817
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| | || || || || ||||||||| | | ||| || ||||| ||||| |
Sbjct 80818 GCTGTTTGCTCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGA 80877
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTT 152073
|||| ||||||| |||| | |||| ||| ||| || ||||| || || || |
Sbjct 80878 TTTTAGCTTTGACATTCTCAGTGGTGTC---ACTGGGCTCAACCTCAAGGGTGATGGTCT 80934
Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| | || |||||||| |||||||||||
Sbjct 80935 TGCCCATCAGGGTCTTCACAAAGACCTGCAT 80965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153296657070305
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