Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23] 35,455 sequences; 1,992,663,268 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4475 98.7 1e-15 seq7100 86.0 7e-12 seq7017 84.2 2e-11 >seq4475 Length=11054148 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || || || | |||||| ||||| || | || ||||| | |||| || | Sbjct 3068325 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGGCCAGGCATAAGACCTCTCTTCT 3068384 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||||||||| |||||||| || || || |||||||| || || ||||| ||||||| Sbjct 3068385 TCAGCCAAAATATAGCAGCAAAAGAGCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGG 3068444 Query 23651 CCAC 23654 |||| Sbjct 3068445 CCAC 3068448 >seq7100 Length=12012154 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 2066934 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 2066993 Query 8465 AGCCACCACGCC 8476 ||||||||||| Sbjct 2066994 CGCCACCACGCC 2067005 >seq7017 Length=3833512 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/93 (81%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| | || |||||||||||| | |||||||||||| |||||||| | Sbjct 1609518 CTCCTGGGCTCAAGCATTCCTTCTGCCTCAGCCTTCTGAGTAGCTGGGACTACAGGCACA 1609577 Query 8465 AGCCACCACGCCAAGC--TAATTTTTGTATTTT 8495 | ||||||||| || |||||||| | |||| Sbjct 1609578 TGTCACCACGCCTGGCTGTAATTTTTATTTTTT 1609610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521256883037000