Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq8041 161 7e-35
seq459 141 7e-29
>seq8041
Length=9355897
Score = 161 bits (178), Expect = 7e-35
Identities = 177/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | || |||||||| || ||| |||||| ||||||||||| ||
Sbjct 8398739 CATGCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 8398798
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 8398799 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 8398858
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| || | | |||| | |||||||| || |
Sbjct 8398859 GGGGATGCCCTCCTTGTCTTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCT 8398917
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| ||||| | ||||||||||||||| ||||||
Sbjct 8398918 CCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8398970
Score = 156 bits (172), Expect = 3e-33
Identities = 176/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | || |||||||| || ||| ||| || ||||||||||| ||
Sbjct 8398967 CATGCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 8399026
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 8399027 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 8399086
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| || | | |||| | |||||||| || |
Sbjct 8399087 GGGGATGCCCTCCTTGTCTTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCT 8399145
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| ||||| | ||||||||||||||| ||||||
Sbjct 8399146 CCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399198
Score = 156 bits (172), Expect = 3e-33
Identities = 176/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | || |||||||| || ||| ||| || ||||||||||| ||
Sbjct 8399195 CATGCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 8399254
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 8399255 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 8399314
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| || | | |||| | |||||||| || |
Sbjct 8399315 GGGGATGCCCTCCTTGTCTTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCT 8399373
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| ||||| | ||||||||||||||| ||||||
Sbjct 8399374 CCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399426
Score = 156 bits (172), Expect = 3e-33
Identities = 176/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | || |||||||| || ||| ||| || ||||||||||| ||
Sbjct 8399423 CATGCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 8399482
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 8399483 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 8399542
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| || | | |||| | |||||||| || |
Sbjct 8399543 GGGGATGCCCTCCTTGTCTTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCT 8399601
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| ||||| | ||||||||||||||| ||||||
Sbjct 8399602 CCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399654
Score = 156 bits (172), Expect = 3e-33
Identities = 176/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | || |||||||| || ||| ||| || ||||||||||| ||
Sbjct 8399651 CATGCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 8399710
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 8399711 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 8399770
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| || | | |||| | |||||||| || |
Sbjct 8399771 GGGGATGCCCTCCTTGTCTTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCT 8399829
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| ||||| | ||||||||||||||| ||||||
Sbjct 8399830 CCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399882
Score = 134 bits (148), Expect = 1e-26
Identities = 158/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||| ||||| ||||||||||| || | || |||| | || |||
Sbjct 8398533 ACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 8398592
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| ||||| ||||||||||| | |||||| |||| || | || ||||| ||
Sbjct 8398593 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 8398652
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| || | | |||| | |||||||| || |||||||||| || || |||||
Sbjct 8398653 ATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 8398711
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | ||||||||||||||| ||||||
Sbjct 8398712 ACCCGTCAAGGTCTTCACGAAGATCTGCATG 8398742
>seq459
Length=3563100
Score = 141 bits (156), Expect = 7e-29
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || |||||||| || || |||||| ||||||||||||||
Sbjct 2214121 CATACCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATC 2214062
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || ||||||||||| || || ||||| | | |||||| || |
Sbjct 2214061 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGG 2214002
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| ||||| ||||| |||| | ||||||||| | |
Sbjct 2214001 AGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCAC-GTTCTCGATGGTGTCGCTAGGCT 2213943
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct 2213942 CCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2213891
Score = 132 bits (146), Expect = 3e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || |||||||| || || |||||| ||||||||||||||
Sbjct 2213893 CATACCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATC 2213834
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || ||||||||||| || || ||||| | | |||||| || |
Sbjct 2213833 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGG 2213774
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | || ||||| ||| ||||| ||||| | | |||||||| || ||
Sbjct 2213773 AGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTC 2213714
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| || || ||||| ||||| | ||||||||||||||| |||||
Sbjct 2213713 CACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2213663
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | | |||||||| || || ||| || |||||||||||||| |
Sbjct 2214345 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 2214286
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || || ||||| | | |||||| || | |||
Sbjct 2214285 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGG 2214226
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| ||||| ||||| | | |||||||| || ||||||
Sbjct 2214225 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACC 2214166
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || || ||||| || || ||||||||||||||||| |||||
Sbjct 2214165 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2214119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359834845335735
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |