Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq459 154 4e-32
seq8041 145 2e-29
seq4088 105 2e-17
seq2669 96.9 8e-15
>seq459
Length=3563100
Score = 154 bits (170), Expect = 4e-32
Identities = 160/208 (77%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || || || || || || |||||||| |||||||| || ||
Sbjct 2213894 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGA--GCCTAGCG 2213951
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||||||||||||||| || ||||| ||||| || ||||| |||||||| |||||||
Sbjct 2213952 ACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAGC 2214011
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || |||||||| || || ||||| |||||||| | |||||| | ||||| |||
Sbjct 2214012 AGAGGCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACA 2214071
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || ||||| || ||
Sbjct 2214072 TCCAGAAGGAGTCGACCCTGCACCTGGT 2214099
Score = 154 bits (170), Expect = 4e-32
Identities = 160/208 (77%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || || || || || || |||||||| |||||||| || |||
Sbjct 2214122 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 2214179
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| || || ||||| ||||| || || || |||||||| |||||||
Sbjct 2214180 ACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAGC 2214239
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || |||||||| || || ||||| |||||||| | |||||| | ||||| |||
Sbjct 2214240 AGAGGCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACA 2214299
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| ||||| || || ||||| || ||
Sbjct 2214300 TCCAGAAAGAGTCGACCCTGCACCTGGT 2214327
Score = 150 bits (166), Expect = 4e-31
Identities = 168/222 (76%), Gaps = 7/222 (3%)
Strand=Plus/Plus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| ||||||| | || |||||||| || | || || || || |||||||| ||||
Sbjct 2213655 AGGTCAAAATGC---AGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGG 2213711
Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
|||| || ||| ||||||||||||| || || ||||| ||||| || || || ||
Sbjct 2213712 TGGA--GCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCAT 2213769
Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
|||||| |||||||| | || |||||||| || || ||||| |||||||| | |||||
Sbjct 2213770 CCCTCCTGACCAGCAGAGGCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACTCT 2213829
Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
| | ||||| ||| |||| || || || || ||||| || ||
Sbjct 2213830 TTCTGATTACAACATCCAGAAGGAGTCGACCCTGCACCTGGT 2213871
>seq8041
Length=9355897
Score = 145 bits (160), Expect = 2e-29
Identities = 166/221 (75%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 8399194 CAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 8399137
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||||||||| ||||| || ||||| || || ||||| || |||||||
Sbjct 8399136 ACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAGC 8399077
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || || | || || |||
Sbjct 8399076 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 8399017
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| ||||| || || ||||| || || || | ||||||
Sbjct 8399016 TCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGA 8398976
Score = 145 bits (160), Expect = 2e-29
Identities = 166/221 (75%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 8399422 CAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 8399365
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||||||||| ||||| || ||||| || || ||||| || |||||||
Sbjct 8399364 ACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAGC 8399305
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || || | || || |||
Sbjct 8399304 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 8399245
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| ||||| || || ||||| || || || | ||||||
Sbjct 8399244 TCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGA 8399204
Score = 145 bits (160), Expect = 2e-29
Identities = 166/221 (75%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 8399650 CAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 8399593
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||||||||| ||||| || ||||| || || ||||| || |||||||
Sbjct 8399592 ACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAGC 8399533
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || || | || || |||
Sbjct 8399532 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 8399473
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| ||||| || || ||||| || || || | ||||||
Sbjct 8399472 TCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGA 8399432
Score = 145 bits (160), Expect = 2e-29
Identities = 166/221 (75%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 8399878 CAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 8399821
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||||||||| ||||| || ||||| || || ||||| || |||||||
Sbjct 8399820 ACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAGC 8399761
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || || | || || |||
Sbjct 8399760 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 8399701
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| ||||| || || ||||| || || || | ||||||
Sbjct 8399700 TCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGA 8399660
Score = 141 bits (156), Expect = 2e-28
Identities = 165/221 (75%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 8398966 CAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 8398909
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||||||||| ||||| || ||||| || || ||||| || |||||||
Sbjct 8398908 ACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAGC 8398849
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || || | || || |||
Sbjct 8398848 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 8398789
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || || || || ||||| || || || | ||||||
Sbjct 8398788 TCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGA 8398748
Score = 134 bits (148), Expect = 3e-26
Identities = 156/207 (75%), Gaps = 5/207 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 8398738 CAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 8398681
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||||||||| ||||| || ||||| || || ||||| || |||||||
Sbjct 8398680 ACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAGC 8398621
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| || || |||||||| |||||||| | || || | || || |||
Sbjct 8398620 AGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 8398561
Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128
|||| || ||||| || ||||| ||||
Sbjct 8398560 TCCAGAAGGAATCCACTCTGCA-CTTG 8398535
>seq4088
Length=12000580
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || ||||| || || |||||||||||||| || | | |||
Sbjct 9606613 CAGATCTTTGTGAAGACCCTGACAGGCAAGACTATCACCCTCGAGGTTGAGTCCACTGAC 9606554
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||| |||| |||||| | || | ||||| || || ||||| || ||||||||
Sbjct 9606553 ACCAATAAGAATGTCAAAGCTACAATCTAAGACAAGGAGGGCATCCCACCTGACCAGCAG 9606494
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || ||| | || |||||||| || ||||| | ||||| | ||||| | ||
Sbjct 9606493 CATCTGATTTTCACGGGGAAACAGCTGGAGGATGGCCGTACTCTGTCAGATTACGATGTT 9606434
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| ||||| || || |||||
Sbjct 9606433 CAGAAAGAGTCCACCTTGCAT 9606413
>seq2669
Length=6508339
Score = 96.9 bits (106), Expect = 8e-15
Identities = 122/166 (73%), Gaps = 4/166 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || || ||||| || || || || || || |||||||||||||| | ||| || |
Sbjct 4561894 CAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGTG 4561951
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||||| ||||| |||||| || || |||||||| || || ||||| || || ||||
Sbjct 4561952 ACACCACTGAGAATGTCAAAGCTAAAATCCAGGACAAGGAGGGCATCCCACCTGATCAGC 4562011
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
| | || || || | || |||||||| || ||||| | |||||
Sbjct 4562012 AGCATCTGATTTTTGTGGGCAAACAGCTAGAGGATGGCTGCACTCT 4562057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203184384413270
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