Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq251 187 2e-42
>seq251
Length=3596318
Score = 187 bits (206), Expect = 2e-42
Identities = 386/573 (67%), Gaps = 6/573 (1%)
Strand=Plus/Minus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
|| || || ||||| | ||| |||| |||||||| |||||||| || ||||| ||||
Sbjct 284727 GGAGATCTAGGCCCAGTATACCGCTTTCAGTGGAGGCATTTTGGGGCCGAATACGAAGAT 284668
Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908
| ||| | |||| | ||||| | || || ||||| | || | || |||||
Sbjct 284667 ACGGATTCAGATTATTCAGGCAAAGGAGTAGACCAACTGCAGAAGGTGACTGACACAATC 284608
Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCC 18968
||||| ||||| | | || |||| || || | | ||||||||||| | ||||
Sbjct 284607 AAAACCAACCCTAATGACAGAAGAATCATCATGTGTGCCTGGAATCCAAAACACCTCCCG 284548
Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTA 19028
| | || || || || || || | | || ||||| ||||| | |||||||| |
Sbjct 284547 CTCACGGCCCTCCCGCCCTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACGGTGAGCTG 284488
Query 19029 TCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCT 19088
|||||||| | || || | || || || |||||||| || || || |||||||| ||
Sbjct 284487 TCCTGCCAGCTGTATGAGCGGTCAGGAGACATGGGCCTGGGCGTGCCCTTCAACATCGCC 284428
Query 19089 GGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTA 19148
| || | || || |||||||| | || || | ||||| || || | || || |
Sbjct 284427 AGCTACTCTCTGCTCACCTACATGATTGCACACATCACAGGCCTGAAGCCAGGTGACCTT 284368
Query 19149 ATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAG 19208
| || || |||| |||||||| |||||| ||||||| | || | | ||| |||||
Sbjct 284367 GTACACACTTTGGGAGATGCACACATTTACCTGAATCACACTGAGCCACTGAAAATGCAG 284308
Query 19209 CTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGATATA 19268
|| | ||| |||| ||||| || || ||||| ||||||| || || | |
Sbjct 284307 CTTCCGCGAGAACCAAGGCCTTTCCCGAAGCTCAAAATGCTTCGAAAAGT---TGAGAAA 284251
Query 19269 A---ACGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccccTA 19325
| | | ||| || || || |||||| |||| || || ||||| || || | |
Sbjct 284250 ACTGATGGCTTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAATCCTCATCCGACTATT 284191
Query 19326 AAAATGGAAATGGCTCTTTAATGGATTTTTAAA 19358
||||||||||||||| ||||| | |||||||
Sbjct 284190 AAAATGGAAATGGCTGTTTAAAGTGCTTTTAAA 284158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399345403528785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |