Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21] 32,573 sequences; 2,004,063,690 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq251 304 2e-77 seq61 273 3e-68 seq25 205 1e-47 seq756 168 8e-37 seq3359 105 8e-18 seq424 96.9 4e-15 seq892 93.3 5e-14 >seq251 Length=3596318 Score = 304 bits (336), Expect = 2e-77 Identities = 553/801 (69%), Gaps = 9/801 (1%) Strand=Plus/Plus Query 145536 TTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTC 145595 ||| || ||||| ||||| || | || || || | |||||| || | | |||||| Sbjct 284170 TTAAACAGCCATTTCCATTTTAATAGTCGGATGAGGATTGTAGCCTTCAATCTGAAAGTC 284229 Query 145596 CTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCT-GGGAAAGG 145654 || ||| ||||| |||| | | ||| || | || || ||||| | |||||||| Sbjct 284230 TTCAGCCTTGAAGCCATCAGTTTTCTCAACTTTTCGAAGCATTTTGAGCTTCGGGAAAGG 284289 Query 145655 GCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCG 145714 | || ||| || ||||| | ||||| ||||| ||| || ||||| | ||| | Sbjct 284290 CCTTGGTTCTCGCGGA-AGCTGCATTTTCAGTGGCTCAGTGTGATTCAGGTAAATGTGTG 284348 Query 145715 CGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774 | || |||| ||| | | ||| || |||| ||||| |||| ||| || | ||||| Sbjct 284349 CATCTCCCAAAGTGTGTACAAGGTCACCTGGCTTCAGGCCTGTGATGTGTGCAATCATGT 284408 Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834 |||| ||||| ||||||||||| |||||||||||||| ||||| |||||||| || || | Sbjct 284409 AGGTGAGCAGAGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCTCCTGACC 284468 Query 145835 GCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGC 145894 ||| |||||||||||||| ||||| ||| | |||||||||||||||| ||| |||| Sbjct 284469 GCTCATACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAAGGGCATGGC 284528 Query 145895 AGGGCGGCAGGGCCATG-GCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTC 145953 ||||||| |||||| || ||||| |||| || |||||||| | || || || Sbjct 284529 AGGGCGGGAGGGCCGTGAGCGGG-AGGTGTTTTGGATTCCAGGCACACATGATGATTCTT 284587 Query 145954 CTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGC 146013 ||| | ||||| | ||||| | ||| | | || ||||| || || | Sbjct 284588 CTGTCATTAGGGTTGGTTTTGATTGTGTCAGTCACCTTCTGCAGTTGGTCTACTCCTTTG 284647 Query 146014 CCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCG 146073 || ||||||| | | || |||| ||||||| || ||||||||||| || | | Sbjct 284648 CCTGAATAATCTGAATCCGTATCTTCGTATTCGGCCCCAAAATGCCTCCACTGAAAGCGG 284707 Query 146074 TAGACGGGCCCCAGGTCCCCGGGCTCCCT-GTGCCCCAGCCCGGCCCGGGCGAGGAAGTC 146132 || || || || || || || || || ||| | ||| | | | | | || | | Sbjct 284708 TATACTGGGCCTAGATCTCC---TTCTCTGGTGGAGAATCCCAG-GCTGTCCAAGACGCC 284763 Query 146133 CCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGT 146192 |||||||| |||||||||||||| || || ||| | | || ||||| || | || || Sbjct 284764 TCGGGACCCATTGGCGTCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGT 284823 Query 146193 GGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGT 146252 ||| ||| |||| ||||| |||| || || | || ||| ||||||| || | ||||| Sbjct 284824 GGATCCCTTGATAAACCACAGCAATTCCTCCAAAACACCCTTCCAGAAAACACGTTTGGT 284883 Query 146253 GGTCAGCAGGGGGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAG 146312 || ||||| || || | | | ||| ||| ||||| ||||| || ||||| Sbjct 284884 TGTGAGCAGTGGAAATTCATCTCTGAGGCTGTAGCGCGCCTGCATGCCGAACACCGACAG 284943 Query 146313 GGTGCCCACGCCCGTCCTGTC 146333 |||||| |||||| | ||| Sbjct 284944 GGTGCCGGTGCCCGTGCAGTC 284964 >seq61 Length=1472917 Score = 273 bits (302), Expect = 3e-68 Identities = 452/645 (70%), Gaps = 7/645 (1%) Strand=Plus/Plus Query 9713 TGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCT 9772 ||||||| || |||| | |||||||||||| || ||||| ||||||| || | ||| Sbjct 30920 TGTACAGTGAGATCTTCTTCATCATCCTGCTCACCATAGACCGGTATCTGGCCATCGTCC 30979 Query 9773 ATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTA 9832 | ||||| ||| || | | || || || | ||| || || ||| ||| | | Sbjct 30980 ACGCTGTGTTTGCCCTGCGAGCCCGGACGGTCACTTTTGGTATCGTCACCAGTGCCTTCA 31039 Query 9833 CCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATG 9892 ||||| ||||||||| | || ||||||| ||| |||| |||| ||| || | Sbjct 31040 CCTGGGGACTGGCAGGGCTAGCAGCCATCCCTGACTTTATCTTCCATGAGTCCCAGGAGG 31099 Query 9893 ACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAGATGTCTACAA-ATGTTTGGAGG 9951 | ||| | | | ||| ||||| |||||| || || | || ||| |||| | Sbjct 31100 AGTTTGGCAAGTCTGTCTGTAATCCTCTTTACCCACAGG-GTAGAGAAGATGCCTGGAAG 31158 Query 9952 CGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCT 10011 | ||| | | | | ||| ||| || ||||| | |||||||||| |||||||| Sbjct 31159 AGTTTCCAAGCTCTGAGGATGAATATCTTGGGTCTCGCTCTGCCTCTGCTTGTTATGGCT 31218 Query 10012 GTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAG 10071 |||||||||| | ||| || | || ||| |||| ||||||| || || || || ||| Sbjct 31219 GTCTGCTACTCAGGAATCATTAAAACGCTGCTGAGATGCCCCAGTAAAAAAAAATATAAG 31278 Query 10072 GCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAAC 10131 |||||| ||||||| |||||||||||||||| || || |||| ||||||||||||||| Sbjct 31279 GCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTCTTCATTTTCTGGACACCCTACAAC 31338 Query 10132 ATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAGTGTGCATTGAGC 10191 | |||||||| || ||| | ||||| | ||| ||| | ||| ||| |||| Sbjct 31339 CTGGTTCTCCTTCTCTCTGCTTTTCAAATGA-ACTTTGAGACCGACTGTGAGCA--GAGC 31395 Query 10192 AGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATC 10251 || | |||| |||| ||||| | || | | ||| || | ||||| || || Sbjct 31396 AGACAGCTGGATCTGGCCATGCTGGTGACGGAGGTGATTGCCCACTCGCACTGCTGTGTC 31455 Query 10252 AACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCACTTCTT 10310 ||||| ||||| ||||| ||||| || |||| ||| ||||| ||||| |||||| || Sbjct 31456 AACCCTGTGATTTACGCCTTCGTCGGTGAGAGGTTCCAGAAG-CACCTCCGCCACTTTTT 31514 Query 10311 CCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCT 10355 ||||| |||||||||||||| | |||| |||||||| ||||| Sbjct 31515 CCACAGGCACGTGGCCATCTACTTGGGCAAATACATCCCATTCCT 31559 Score = 273 bits (302), Expect = 3e-68 Identities = 452/645 (70%), Gaps = 7/645 (1%) Strand=Plus/Plus Query 176599 TGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCT 176658 ||||||| || |||| | |||||||||||| || ||||| ||||||| || | ||| Sbjct 30920 TGTACAGTGAGATCTTCTTCATCATCCTGCTCACCATAGACCGGTATCTGGCCATCGTCC 30979 Query 176659 ATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTA 176718 | ||||| ||| || | | || || || | ||| || || ||| ||| | | Sbjct 30980 ACGCTGTGTTTGCCCTGCGAGCCCGGACGGTCACTTTTGGTATCGTCACCAGTGCCTTCA 31039 Query 176719 CCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATG 176778 ||||| ||||||||| | || ||||||| ||| |||| |||| ||| || | Sbjct 31040 CCTGGGGACTGGCAGGGCTAGCAGCCATCCCTGACTTTATCTTCCATGAGTCCCAGGAGG 31099 Query 176779 ACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAGATGTCTACAA-ATGTTTGGAGG 176837 | ||| | | | ||| ||||| |||||| || || | || ||| |||| | Sbjct 31100 AGTTTGGCAAGTCTGTCTGTAATCCTCTTTACCCACAGG-GTAGAGAAGATGCCTGGAAG 31158 Query 176838 CGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCT 176897 | ||| | | | | ||| ||| || ||||| | |||||||||| |||||||| Sbjct 31159 AGTTTCCAAGCTCTGAGGATGAATATCTTGGGTCTCGCTCTGCCTCTGCTTGTTATGGCT 31218 Query 176898 GTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAG 176957 |||||||||| | ||| || | || ||| |||| ||||||| || || || || ||| Sbjct 31219 GTCTGCTACTCAGGAATCATTAAAACGCTGCTGAGATGCCCCAGTAAAAAAAAATATAAG 31278 Query 176958 GCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAAC 177017 |||||| ||||||| |||||||||||||||| || || |||| ||||||||||||||| Sbjct 31279 GCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTCTTCATTTTCTGGACACCCTACAAC 31338 Query 177018 ATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAGTGTGCATTGAGC 177077 | |||||||| || ||| | ||||| | ||| ||| | ||| ||| |||| Sbjct 31339 CTGGTTCTCCTTCTCTCTGCTTTTCAAATGA-ACTTTGAGACCGACTGTGAGCA--GAGC 31395 Query 177078 AGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATC 177137 || | |||| |||| ||||| | || | | ||| || | ||||| || || Sbjct 31396 AGACAGCTGGATCTGGCCATGCTGGTGACGGAGGTGATTGCCCACTCGCACTGCTGTGTC 31455 Query 177138 AACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCACTTCTT 177196 ||||| ||||| ||||| ||||| || |||| ||| ||||| ||||| |||||| || Sbjct 31456 AACCCTGTGATTTACGCCTTCGTCGGTGAGAGGTTCCAGAAG-CACCTCCGCCACTTTTT 31514 Query 177197 CCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCT 177241 ||||| |||||||||||||| | |||| |||||||| ||||| Sbjct 31515 CCACAGGCACGTGGCCATCTACTTGGGCAAATACATCCCATTCCT 31559 Score = 123 bits (136), Expect = 3e-23 Identities = 220/317 (69%), Gaps = 13/317 (4%) Strand=Plus/Plus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051 |||| ||||| | |||| ||||||||| | ||| | | || ||| | || | | Sbjct 116267 TGCCACTGCTTGTCATGGTCATCTGCTACTCAGGAATCCTTAAAACCCTGCTTCGGTGTC 116326 Query 10052 CCAGCAAGAAGAAGT---ACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108 || | |||||||| |||||||||| ||||||||||| | ||||||| | | ||| | Sbjct 116327 GCAACGAGAAGAAGAGGCACAAGGCCATGAGGCTCATCTTCGCCATCATGATCGTCTACT 116386 Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCT-- 10166 || | |||||| | ||||||||||| || ||||| ||| |||||||| | | || | Sbjct 116387 TTCTCTTTTGGGCTCCCTACAACATCGTCCTCCTCCTGAGCACCTTTCAGGAATCCTTTG 116446 Query 10167 -TCTTA--ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 10223 ||| | | |||||||| || | | || ||||| || ||| | | ||| | Sbjct 116447 GTCTGAATAACTGCAGTG-GCTCT----AATAGACTGGACCAAGCCATGCAGGTGACAGA 116501 Query 10224 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 10283 || | | || ||||| ||||||||||| | ||||| || ||||| |||||||| Sbjct 116502 GACCCTGGGGATGACGCACTGCTGCATCAACCCCATCATCTATGCCTTCGTCGGGGAGAA 116561 Query 10284 GTTTAGAAGACACCTGT 10300 ||| |||| |||||| Sbjct 116562 GTTCAGAAAGTACCTGT 116578 Score = 123 bits (136), Expect = 3e-23 Identities = 220/317 (69%), Gaps = 13/317 (4%) Strand=Plus/Plus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937 |||| ||||| | |||| ||||||||| | ||| | | || ||| | || | | Sbjct 116267 TGCCACTGCTTGTCATGGTCATCTGCTACTCAGGAATCCTTAAAACCCTGCTTCGGTGTC 116326 Query 176938 CCAGCAAGAAGAAGT---ACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994 || | |||||||| |||||||||| ||||||||||| | ||||||| | | ||| | Sbjct 116327 GCAACGAGAAGAAGAGGCACAAGGCCATGAGGCTCATCTTCGCCATCATGATCGTCTACT 116386 Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCT-- 177052 || | |||||| | ||||||||||| || ||||| ||| |||||||| | | || | Sbjct 116387 TTCTCTTTTGGGCTCCCTACAACATCGTCCTCCTCCTGAGCACCTTTCAGGAATCCTTTG 116446 Query 177053 -TCTTA--ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 177109 ||| | | |||||||| || | | || ||||| || ||| | | ||| | Sbjct 116447 GTCTGAATAACTGCAGTG-GCTCT----AATAGACTGGACCAAGCCATGCAGGTGACAGA 116501 Query 177110 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 177169 || | | || ||||| ||||||||||| | ||||| || ||||| |||||||| Sbjct 116502 GACCCTGGGGATGACGCACTGCTGCATCAACCCCATCATCTATGCCTTCGTCGGGGAGAA 116561 Query 177170 GTTTAGAAGACACCTGT 177186 ||| |||| |||||| Sbjct 116562 GTTCAGAAAGTACCTGT 116578 >seq25 Length=14465811 Score = 205 bits (226), Expect = 1e-47 Identities = 147/168 (88%), Gaps = 1/168 (1%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||| |||| |||| |||| ||||||||||||||||| |||||||||||| Sbjct 2982284 AGGCCTGTGATGTGTGCGATCATGCAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 2982343 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| ||||| |||||||||||||||||||| ||||| ||| | || Sbjct 2982344 ACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 2982403 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG-GCGGG 145916 |||||||||||||| ||| |||||||||||| ||||||||| ||||| Sbjct 2982404 ACGTAGAACTGGCAAAGGGCGTGGCAGGGCGGGAGGGCCATGAGCGGG 2982451 >seq756 Length=2993967 Score = 168 bits (186), Expect = 8e-37 Identities = 132/157 (84%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||| | |||||||| |||||||| || ||||| ||||||||||||||||| | ||| Sbjct 528964 CAGCGACGCAGCCTCAGTCTGAGGGTCTTCAGCTTCTCCCCCAGGGAGTTCACATGCTCC 528905 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || ||| | || ||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 528904 TTGAT---GTCAGGGCCGTGGTTCTCCGCCTGCGGCATCACCTCCTCCAGGTAAAACTGG 528848 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 528847 ATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCT 528811 Score = 113 bits (124), Expect = 5e-20 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 |||||| |||||||| | ||||||||||| ||||||||||| || |||||||| ||||| Sbjct 531251 TCAGTTCTTCATCTTCATTGTCATGTAGGCTTCTATGTAGTTGATAAAGATGTCGAACTC 531192 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| ||||||||||| || || ||||||| Sbjct 531191 ACTCATGGCTTTGTAGACCCCCTTCTCTTGGAGCT 531157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 113/151 (75%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 |||||| ||||| ||||||| |||||||| | |||||| ||||||||||||||||||| Sbjct 527681 AAAGAAAGTCTTCACCCTGCCAAAGGCGGCTCGGAGCTCCCGGAGCATGTGGGGCAGGCT 527622 Query 138357 GG-TGGGCAATGTAGGGCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCACA 138415 || |||| | || | |||| || | |||||| || | | | | | ||| || Sbjct 527621 GGCTGGGAAGTG-GGTGCAGCTGTGCTCAGACTGGGTGCCTTGGTCTTGGCTGGCTGCCA 527563 Query 138416 CCCCGGCCAGGAGAACCAGGCAACACAGCAG 138446 | ||||||||||| | |||||| || ||||| Sbjct 527562 CTCCGGCCAGGAGGATCAGGCAGCAGAGCAG 527532 Score = 82.4 bits (90), Expect = 9e-11 Identities = 61/71 (86%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 138236 CCTTAAAGTCTTCCAGCAGGGACCCGTCCAGCAACATGTTGTCCAGCTGGTCCTTCAT-- 138293 |||||||||| ||||||||||||| | || || |||||||||||||||||||||||| Sbjct 528571 CCTTAAAGTCCTCCAGCAGGGACCTGGTCAACAGCATGTTGTCCAGCTGGTCCTTCATTT 528512 Query 138294 -CTGAAAGAAG 138303 ||| |||||| Sbjct 528511 GCTGCAAGAAG 528501 >seq3359 Length=23808 Score = 105 bits (116), Expect = 8e-18 Identities = 221/329 (67%), Gaps = 3/329 (1%) Strand=Plus/Plus Query 9487 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 9546 || || ||| || |||| || | ||||| ||| ||||||| | || |||| |||| Sbjct 14221 CTGGTATTTGTCATTGGCCTGATTGGCAACATCCTAGTGGTCCTAGTTCTCATGCAATAC 14280 Query 9547 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 9606 | || | ||| || | | || | ||| | || | ||| |||| || |||||| || | Sbjct 14281 AAGAGGCTCAGAAGCATGACCAGCATCTACCTCCTCAACCTGGCCATTTCTGACCTGATC 14340 Query 9607 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 9666 || || || || |||| || ||||| |||| | || | |||| |||| |||| Sbjct 14341 TTCCTCTTCACACTGCCCTTCTGGATTGACTACAAGC---TGAAGGATGACTGGATTTTT 14397 Query 9667 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 9726 || | | ||||||| ||||| || | | || ||| ||||||| || || Sbjct 14398 GGGGATCACATGTGTAAGTTGCTCTCTGGGCTCTATTTCATTGGCTTGTACAGTGAGATC 14457 Query 9727 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCT 9786 || | |||||||||||| || | |||||||| || ||||||||| |||| || ||| Sbjct 14458 TTCTTCATCATCCTGCTCACCATTGACAGGTACCTGGCTGTTGTCCATGCAGTCTTTGCC 14517 Query 9787 TTGAGGTTTAGAACAGTAACCTGTGGCAT 9815 || || | | || || |||| ||| || Sbjct 14518 CTGCGGGCTCGGACTGTCACCTTTGGTAT 14546 Score = 105 bits (116), Expect = 8e-18 Identities = 221/329 (67%), Gaps = 3/329 (1%) Strand=Plus/Plus Query 176373 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 176432 || || ||| || |||| || | ||||| ||| ||||||| | || |||| |||| Sbjct 14221 CTGGTATTTGTCATTGGCCTGATTGGCAACATCCTAGTGGTCCTAGTTCTCATGCAATAC 14280 Query 176433 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 176492 | || | ||| || | | || | ||| | || | ||| |||| || |||||| || | Sbjct 14281 AAGAGGCTCAGAAGCATGACCAGCATCTACCTCCTCAACCTGGCCATTTCTGACCTGATC 14340 Query 176493 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 176552 || || || || |||| || ||||| |||| | || | |||| |||| |||| Sbjct 14341 TTCCTCTTCACACTGCCCTTCTGGATTGACTACAAGC---TGAAGGATGACTGGATTTTT 14397 Query 176553 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 176612 || | | ||||||| ||||| || | | || ||| ||||||| || || Sbjct 14398 GGGGATCACATGTGTAAGTTGCTCTCTGGGCTCTATTTCATTGGCTTGTACAGTGAGATC 14457 Query 176613 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCT 176672 || | |||||||||||| || | |||||||| || ||||||||| |||| || ||| Sbjct 14458 TTCTTCATCATCCTGCTCACCATTGACAGGTACCTGGCTGTTGTCCATGCAGTCTTTGCC 14517 Query 176673 TTGAGGTTTAGAACAGTAACCTGTGGCAT 176701 || || | | || || |||| ||| || Sbjct 14518 CTGCGGGCTCGGACTGTCACCTTTGGTAT 14546 >seq424 Length=3736256 Score = 96.9 bits (106), Expect = 4e-15 Identities = 316/483 (65%), Gaps = 31/483 (6%) Strand=Plus/Minus Query 176514 TGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTG 176573 ||||| |||||||||| | || | |||| ||| ||||| | | |||| || || Sbjct 823251 TGGATTCACTATATTG-AGTGGA--ATGAGTGGGGGTTTGGCCACTGCTTGTGCAAGTTG 823195 Query 176574 CTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACA 176633 ||| || | | | ||||| ||||||| || |||| | ||||||||||||||| Sbjct 823194 CTCTCTGGGCTTTATCACATGGGTTTGTACAGTGAGATCTTCTTCATCATCCTGCTAACC 823135 Query 176634 GTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCT-TTGAGGTTTAGAACAGTAAC 176692 ||||| ||||||| ||| ||||| | |||| ||| || | | || || || Sbjct 823134 ATAGACTGGTATCTGGCTATTGTCCACACTGTGTTTGCCCTTCAAGCCCCGATG-GTCAC 823076 Query 176693 CTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGA 176752 | ||| || || ||| || | |||||| |||||||| | |||||||||| Sbjct 823075 TTTTGGTATCGTCACCAATGCCTTCACCTGGGGCTTGGCAGGGCTAGCAGCCCTCCCTGA 823016 Query 176753 ATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTT-CAGTGTGATCCTTACTACC 176811 |||| |||| |||| || | ||||| | |||| || ||||| | Sbjct 823015 ATTTATCTTCCATGAGTCCCTCG---------GTAGGTCTGCAGTCC--TCTTTACT--C 822969 Query 176812 CAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTC 176871 | |||| | | ||| |||| || | | | | | || ||| || ||| Sbjct 822968 AAAGGATGGGGA-AGATGCCTGGAATCGTTTCTAATCTCTGAGGATGTATATCTTTGGTC 822910 Query 176872 TCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGA 176931 ||| | ||||||||||||||||||||||||||| || | ||| || | || |||| ||| Sbjct 822909 TCACTCTGCCTCTGCTCATTATGGCTGTCTGCTGCTCAGGAATCATTAAAACACTGCTGA 822850 Query 176932 GGCGCCCCAG-------CA----AGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCAT 176980 | ||||||| || | || || ||||||| ||| ||||||| |||||||| Sbjct 822849 GAAGCCCCAGTTTAAAACAAAACAAAACAAAAACAAGGCTATCTGGCTCATTTTTGTCAT 822790 Query 176981 CAT 176983 ||| Sbjct 822789 CAT 822787 Score = 96.9 bits (106), Expect = 4e-15 Identities = 316/483 (65%), Gaps = 31/483 (6%) Strand=Plus/Minus Query 9628 TGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTG 9687 ||||| |||||||||| | || | |||| ||| ||||| | | |||| || || Sbjct 823251 TGGATTCACTATATTG-AGTGGA--ATGAGTGGGGGTTTGGCCACTGCTTGTGCAAGTTG 823195 Query 9688 CTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACA 9747 ||| || | | | ||||| ||||||| || |||| | ||||||||||||||| Sbjct 823194 CTCTCTGGGCTTTATCACATGGGTTTGTACAGTGAGATCTTCTTCATCATCCTGCTAACC 823135 Query 9748 GTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCT-TTGAGGTTTAGAACAGTAAC 9806 ||||| ||||||| ||| ||||| | |||| ||| || | | || || || Sbjct 823134 ATAGACTGGTATCTGGCTATTGTCCACACTGTGTTTGCCCTTCAAGCCCCGATG-GTCAC 823076 Query 9807 CTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGA 9866 | ||| || || ||| || | |||||| |||||||| | |||||||||| Sbjct 823075 TTTTGGTATCGTCACCAATGCCTTCACCTGGGGCTTGGCAGGGCTAGCAGCCCTCCCTGA 823016 Query 9867 ATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTT-CAGTGTGATCCTTACTACC 9925 |||| |||| |||| || | ||||| | |||| || ||||| | Sbjct 823015 ATTTATCTTCCATGAGTCCCTCG---------GTAGGTCTGCAGTCC--TCTTTACT--C 822969 Query 9926 CAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTC 9985 | |||| | | ||| |||| || | | | | | || ||| || ||| Sbjct 822968 AAAGGATGGGGA-AGATGCCTGGAATCGTTTCTAATCTCTGAGGATGTATATCTTTGGTC 822910 Query 9986 TCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGA 10045 ||| | ||||||||||||||||||||||||||| || | ||| || | || |||| ||| Sbjct 822909 TCACTCTGCCTCTGCTCATTATGGCTGTCTGCTGCTCAGGAATCATTAAAACACTGCTGA 822850 Query 10046 GGCGCCCCAG-------CA----AGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCAT 10094 | ||||||| || | || || ||||||| ||| ||||||| |||||||| Sbjct 822849 GAAGCCCCAGTTTAAAACAAAACAAAACAAAAACAAGGCTATCTGGCTCATTTTTGTCAT 822790 Query 10095 CAT 10097 ||| Sbjct 822789 CAT 822787 >seq892 Length=2164436 Score = 93.3 bits (102), Expect = 5e-14 Identities = 248/375 (66%), Gaps = 38/375 (10%) Strand=Plus/Minus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGC-GCAAAGTCCTC 145598 || ||||| |||||| || | || || || | |||||| || | | | |||| | || Sbjct 1516507 ACAGCCATTTCCATGTTAATAGTCGGATGAGGATTGTAGCCTTCAATCTGAAAAGCCTTC 1516448 Query 145599 CGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGG-GAAAGGGCC 145657 ||| |||||||||| || | ||| | | |||||| ||||| | | |||||||| Sbjct 1516447 AGCCTTGAAGTCATCAATTTTCTCAGCTTTTCAAAGGATCTTGAGCTTCGAGAAAGGGCT 1516388 Query 145658 GGGGGCTC-CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCG 145716 || || ||| ||||| | ||||| |||| ||| || ||||| | || || Sbjct 1516387 TGGTTCTTGCTGA--AGCTGCAT-TTCAGCAGCTCAGTGTGATTCAGGTAAATGTATGCA 1516331 Query 145717 TCCCCCAGGACGTGGATG--AAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774 || || || ||| | ||||| ||| |||| ||| | || ||||| Sbjct 1516330 TCTCCT--GAAGTGCGTACAAAGTC------------GCCTGTGATGTGTGTGATCATGT 1516285 Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834 |||| |||| ||| |||||||||||||| ||||| ||| ||| || || | Sbjct 1516284 AGGT---------GTAGTGGGCGATGTTGAAGGGCACACCCAGGCCCCTGTGTCCAGACC 1516234 Query 145835 GCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGC 145894 ||||||||| ||||||| ||||| || || ||||||||||| ||| |||| Sbjct 1516233 AGTGGTACAGCCGGCAGGACAGCTCACCTCC-------TAGAACTGGCAAAGGGCATGGC 1516181 Query 145895 AGGGCGGCAGGGCCA 145909 || || ||||||| Sbjct 1516180 CCGGGGGGAGGGCCA 1516166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589836542854920