Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21] 32,573 sequences; 2,004,063,690 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq251 188 5e-43 >seq251 Length=3596318 Score = 188 bits (208), Expect = 5e-43 Identities = 442/661 (67%), Gaps = 7/661 (1%) Strand=Plus/Plus Query 97009 GGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAA 97068 ||||||||||| || ||||| ||||||| | | || | ||| ||||||||| ||| Sbjct 284282 GGGAAAGGCCTTGGTTCTCGCGGAAGCTGCATTTTCAGTGGCTCAGTGTGATTCAGGTAA 284341 Query 97069 ATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCG 97128 ||||| |||||||| |||||||| | || || || || | | |||| || || Sbjct 284342 ATGTGTGCATCTCCCAAAGTGTGTACAAGGTCACCTGGCTTCAGGCCTGTGATGTGTGCA 284401 Query 97129 ATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCA 97188 ||||| | || | ||||| ||||| || ||||| || ||||| || || ||||| || Sbjct 284402 ATCATGTAGGTGAGCAGAGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCT 284461 Query 97189 GCTGATCTTTGATATAACTGACAGGAAAGCTTTCCAT-CACACACATAAAACTGACTCAA 97247 |||| | | ||| | ||| ||||| |||| || | ||| ||| || ||||| | | Sbjct 284462 CCTGACCGCTCATACAGCTGGCAGGACAGCTCACCGTTCAC-CACGTAGAACTGGCAAAG 284520 Query 97248 TACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAA 97307 |||| ||||| || | ||| | || | | | |||||| |||||||| | Sbjct 284521 GGCATGGCAGGGCGGGAGGGCCGTGAGCGGGAGGTGTTTTGGATTCCAGGCACACATGAT 284580 Query 97308 CATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAAC 97367 |||||||| || | ||||| || | || || | | | | || || | ||| || || Sbjct 284581 GATTCTTCTGTCATTAGGGTTGGTTTTGATTGTGTCAGTCACCTTCTGCAGTTGGTCTAC 284640 Query 97368 GCCTTCTCCACCATAATTGTGCTTAAG-ACCTTGATATTCTGCTCCAAAATGCCTCCATT 97426 |||| || ||||| || | | | ||| ||||| || |||||||||||||| | Sbjct 284641 TCCTTTGCCTGAATAATC-TGAATCCGTATCTTCGTATTCGGCCCCAAAATGCCTCCACT 284699 Query 97427 GGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTA 97486 | || | || || || || || ||||||||| || |||| || || | || | Sbjct 284700 GAAAGCGGTATACTGGGCCTAGATCTCCTTCT---CTGGTGGAGAATCCCAGGCTGTCCA 284756 Query 97487 AATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGC 97546 | | | || ||||| || ||||| || | ||| || | | ||||| || Sbjct 284757 AGACGCCTCGGGACCCATTGGCGTCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAG 284816 Query 97547 TGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTC 97606 || || ||||| |||||||||||| |||||| |||| |||||| |||| || || | Sbjct 284817 CGTTTGTGGATCCCTTGATAAACCACAGCAATTCCTCCAAAACACCCTTCCAGAAAACAC 284876 Query 97607 TCTTAGTTGTTAAGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCATTCCAAAAA 97666 || ||||| | || ||||| || | | | |||||| | | |||||| || || | Sbjct 284877 GTTTGGTTGTGAGCAGTGGAAATTCATCTCTGAGGCTGTAGCGCGCCTGCATGCCGAACA 284936 Query 97667 C 97667 | Sbjct 284937 C 284937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346646332495610