Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq251 188 5e-43
>seq251
Length=3596318
Score = 188 bits (208), Expect = 5e-43
Identities = 442/661 (67%), Gaps = 7/661 (1%)
Strand=Plus/Plus
Query 97009 GGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAA 97068
||||||||||| || ||||| ||||||| | | || | ||| ||||||||| |||
Sbjct 284282 GGGAAAGGCCTTGGTTCTCGCGGAAGCTGCATTTTCAGTGGCTCAGTGTGATTCAGGTAA 284341
Query 97069 ATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCG 97128
||||| |||||||| |||||||| | || || || || | | |||| || ||
Sbjct 284342 ATGTGTGCATCTCCCAAAGTGTGTACAAGGTCACCTGGCTTCAGGCCTGTGATGTGTGCA 284401
Query 97129 ATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCA 97188
||||| | || | ||||| ||||| || ||||| || ||||| || || ||||| ||
Sbjct 284402 ATCATGTAGGTGAGCAGAGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCT 284461
Query 97189 GCTGATCTTTGATATAACTGACAGGAAAGCTTTCCAT-CACACACATAAAACTGACTCAA 97247
|||| | | ||| | ||| ||||| |||| || | ||| ||| || ||||| | |
Sbjct 284462 CCTGACCGCTCATACAGCTGGCAGGACAGCTCACCGTTCAC-CACGTAGAACTGGCAAAG 284520
Query 97248 TACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAA 97307
|||| ||||| || | ||| | || | | | |||||| |||||||| |
Sbjct 284521 GGCATGGCAGGGCGGGAGGGCCGTGAGCGGGAGGTGTTTTGGATTCCAGGCACACATGAT 284580
Query 97308 CATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAAC 97367
|||||||| || | ||||| || | || || | | | | || || | ||| || ||
Sbjct 284581 GATTCTTCTGTCATTAGGGTTGGTTTTGATTGTGTCAGTCACCTTCTGCAGTTGGTCTAC 284640
Query 97368 GCCTTCTCCACCATAATTGTGCTTAAG-ACCTTGATATTCTGCTCCAAAATGCCTCCATT 97426
|||| || ||||| || | | | ||| ||||| || |||||||||||||| |
Sbjct 284641 TCCTTTGCCTGAATAATC-TGAATCCGTATCTTCGTATTCGGCCCCAAAATGCCTCCACT 284699
Query 97427 GGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTA 97486
| || | || || || || || ||||||||| || |||| || || | || |
Sbjct 284700 GAAAGCGGTATACTGGGCCTAGATCTCCTTCT---CTGGTGGAGAATCCCAGGCTGTCCA 284756
Query 97487 AATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGC 97546
| | | || ||||| || ||||| || | ||| || | | ||||| ||
Sbjct 284757 AGACGCCTCGGGACCCATTGGCGTCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAG 284816
Query 97547 TGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTC 97606
|| || ||||| |||||||||||| |||||| |||| |||||| |||| || || |
Sbjct 284817 CGTTTGTGGATCCCTTGATAAACCACAGCAATTCCTCCAAAACACCCTTCCAGAAAACAC 284876
Query 97607 TCTTAGTTGTTAAGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCATTCCAAAAA 97666
|| ||||| | || ||||| || | | | |||||| | | |||||| || || |
Sbjct 284877 GTTTGGTTGTGAGCAGTGGAAATTCATCTCTGAGGCTGTAGCGCGCCTGCATGCCGAACA 284936
Query 97667 C 97667
|
Sbjct 284937 C 284937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346646332495610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |