Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq17 98.7 2e-15
>seq17
Length=4188677
Score = 98.7 bits (108), Expect = 2e-15
Identities = 116/157 (74%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960
|||| ||||| ||||| || || || || || ||||| || || |||||||| || |||
Sbjct 339068 TGGTGGTACTTCATATCTAAGGGAATTGAGTATTTGGACACAGTGTTTTTCATCCTGAGG 339127
Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020
|| ||| || || || ||| || |||||||||||||| | ||| |||||||| |
Sbjct 339128 AAGAAAAACAACCAAGTCTCTTTCCTTCACGTATATCATCACTGTACAATGTTTACATTG 339187
Query 52021 GGATGGATAGGTATTAAATGGTTTGCTGGAGGTCAGG 52057
| ||||| || ||||| ||| | || || || ||||
Sbjct 339188 TGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACAGG 339224
Score = 96.9 bits (106), Expect = 6e-15
Identities = 102/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||| ||||| ||||| ||||| || |||||||| |||||||| | || |||||
Sbjct 340259 GCATTTTTCGGAGCCCAGCTGAATTCCTTCATCCATGTGATTATGTATTCATACTATGGG 340318
Query 52117 ATGGCCGCTTGTGGTCCTATG-TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
|| | || | ||| || | ||||||| |||||| ||||||||||| || || || ||
Sbjct 340319 TTGACTGCCTTTGGCCCGTGGATTCAGAA-GTATCTTTGGTGGAAACGATACCTGACCAT 340377
Query 52176 AATGCAGTTGGT 52187
||||| ||||
Sbjct 340378 GTTGCAGCTGGT 340389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922820908882920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |