Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq99 123 3e-23
seq3709 102 9e-17
seq684 100 3e-16
seq10222 98.7 1e-15
seq1280 98.7 1e-15
seq469 98.7 1e-15
seq119 95.1 1e-14
seq205 89.7 6e-13
seq2167 86.0 7e-12
seq89 82.4 9e-11
>seq99
Length=2554289
Score = 123 bits (136), Expect = 3e-23
Identities = 167/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||||| |||| |||| || |||||| || || ||||||||||
Sbjct 1822264 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 1822323
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || |||||||| || ||||| ||||| ||||||||||| | ||
Sbjct 1822324 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCGCTGCTGGTCAGGAGGG 1822383
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| || ||||| ||| ||| || || | || | | |||||||| | |||||
Sbjct 1822384 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACC 1822443
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189
|| | |||||||| |||||||| | ||||| || ||||| |||||||| ||
Sbjct 1822444 TCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATTTTGAC 1822496
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||||| |||| |||| || |||||| || || ||||||||||
Sbjct 1822036 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 1822095
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || |||||||| || ||||| ||||| ||||||||||| | ||
Sbjct 1822096 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCGCTGCTGGTCAGGAGGG 1822155
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| || ||||| ||| ||| || || | || | | |||||||| | |||||
Sbjct 1822156 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACC 1822215
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||| ||||| || || ||||| || ||||| |||||
Sbjct 1822216 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1822262
>seq3709
Length=210978
Score = 102 bits (112), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 91324 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 91265
Query 60125 ATACTACCGAGGATTG 60140
|||||| |||||| ||
Sbjct 91264 ATACTAACGAGGAATG 91249
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 134982 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 135041
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 135042 TACTAACGAGGA 135053
>seq684
Length=8613401
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 2188118 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 2188059
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 2188058 ATACTAACGAGGA 2188046
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 4043078 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 4043019
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 4043018 ATACTAACGAGGA 4043006
>seq10222
Length=1112
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 520 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 461
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 460 TACTAACGAGGA 449
>seq1280
Length=1139451
Score = 98.7 bits (108), Expect = 1e-15
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 109922 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 109863
Query 60125 ATACTACCGAGGATTGA 60141
|||||| |||||| |||
Sbjct 109862 ATACTAACGAGGAATGA 109846
>seq469
Length=2995260
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1063101 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1063160
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 1063161 TACTAACGAGGA 1063172
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1069971 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1070030
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 1070031 TACTAACGAGGA 1070042
>seq119
Length=227305
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| |||| ||| ||| || ||||||||||| || | |||| || | || ||
Sbjct 86650 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGATGGAGTGCGACCATCCTC 86709
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
||||| || | || || || || |||||||||| | || | || |||||||||
Sbjct 86710 CAGCTGTTTGCTCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 86769
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
|||||| ||||| || | ||||| || | || || || | |||||||| ||
Sbjct 86770 GATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTT 86829
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| | || ||||| ||||||| |||||
Sbjct 86830 GCCCATCAGGGTCTTCACAAAGACCTGCAT 86859
>seq205
Length=8045950
Score = 89.7 bits (98), Expect = 6e-13
Identities = 147/210 (70%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| |||| | | ||||| | ||| |||| | | |||||| | |||| ||
Sbjct 434688 CACCAAGTGCAGGGCGGACTCCT---GGATACTGTAGTGTGACAGAGTGTCCCCGTCCTC 434744
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
||||| || || || || || || |||||||||| | ||| | || |||||||||
Sbjct 434745 CAGCTGTTTGCCCGCAAAAATCAGATGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 434804
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
| |||| ||||| || | ||||| || | || || ||| ||||||| ||
Sbjct 434805 GGTTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACC-CGAGGGTGATGGCCTT 434863
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||||||| ||||| |||||||| |||||
Sbjct 434864 GCCCGTTAGGGTCTTCACAAAGATCTGCAT 434893
>seq2167
Length=69529
Score = 86.0 bits (94), Expect = 7e-12
Identities = 55/60 (92%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 60077 GGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGG 60136
|||||||||||| ||||||||||||||||||| || ||||| |||||||||||| |||||
Sbjct 53504 GGAATCGAACCCCGGTCTCCCGCGTGACAGGCAGAGATACTTACCACTATACTAACGAGG 53563
>seq89
Length=3644534
Score = 82.4 bits (90), Expect = 9e-11
Identities = 129/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| |||||||| || || | | | || || | ||||| ||||| | || |||||
Sbjct 1710816 CTCCTTCTGAATATTCTAGTCTGACGGGGTGCGGCCCTCATCCAGCTGTTCGCCCGCGAA 1710757
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
| || ||||||||||| | || | || ||||||||| ||||||| | ||| |
Sbjct 1710756 ACTCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTTGATTTTAGCTCTGACATT 1710697
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | ||||| | | || || |||| |||| ||| |||||| | || |||| ||
Sbjct 1710696 CTCAGTGGTGTCACAGGGCTCAACCTCGAGGGTGAGGGTCTTGCCCATCAGGCTCTTCAC 1710637
Query 43172 AAAGA 43176
|||||
Sbjct 1710636 AAAGA 1710632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571584777316440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |