Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq221 1903 0.0
seq170 91.5 1e-13
>seq221
Length=1350224
Score = 1903 bits (2110), Expect = 0.0
Identities = 1453/1723 (84%), Gaps = 49/1723 (3%)
Strand=Plus/Plus
Query 107071 GTCCTAACTCCAGTCCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGTCCAT 107130
||||||| |||| ||||||| || |||| ||| || |||||| | ||| |||||
Sbjct 1144818 GTCCTAATCCCAGCCCCAGCACGATCAGCT---TTGTAGGGTCAGGTGAGAGAACTCCAT 1144874
Query 107131 CCACA-------------AGGGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGA 107177
| || ||| || ||||| | || ||||||||||| ||||||| |||
Sbjct 1144875 CAGCAGGCTGGGTGTATGAGGATCCTAGGCGGATCTGGACTGAGGATACTTGTCTAGAGA 1144934
Query 107178 AGACATCTATCTTTACCATCACTCTGGAGTTGAACTTGATGTTCT-------------GG 107224
||| |||| ||| || ||||| |||||||||||||||||||| ||
Sbjct 1144935 AGAAATCTGGTTTTGCCTTCACTGTGGAGTTGAACTTGATGTTCCTTGAGCCCATTCAGG 1144994
Query 107225 ATTAGTTTGTAATTAAAGGCATTTTGTTCTGTCCAAGGATCTCCTCCTCCACCTTGCCTG 107284
|||||||||||||| |||||||||||||||||| |||||| || |||||| |||| ||||
Sbjct 1144995 ATTAGTTTGTAATTGAAGGCATTTTGTTCTGTCTAAGGATTTCATCCTCCTCCTTCCCTG 1145054
Query 107285 TGCCCAAACTCTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTG 107344
||| |||||||| | ||||||||| ||| ||||||| || ||||||||||||| | ||
Sbjct 1145055 TGCACAAACTCTGCCAATCTCCCATTCCACGAAGATGACTTGGTGGAAGAAGAAATTCTG 1145114
Query 107345 CCGGGGACATCATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAG 107404
|||| | |||||||||||||| ||||||||||||||||||||||| ||||| || ||||
Sbjct 1145115 CCGGAGGCATCATCTGTGGGCTTTGGGCTGCTATATGCTGCTGGCCCTTGTTGCTTTGAG 1145174
Query 107405 ACTTTCCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCA 107464
|||||| ||||| | |||||||| |||| |||| ||||||| |||||||||||||| ||
Sbjct 1145175 ACTTTCTCTCAGACTGAAATGTGACGTAGTTTCCCTGGATCTAGAGTCCAGGGACTTGCA 1145234
Query 107465 GAGTCAGCACTGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCAT 107524
|| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1145235 AAGCCAGCACTGTAGGGACATCTTGTACAAGTCCCTGAAGCTGCCAGCAAAGAGATCCAT 1145294
Query 107525 CAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAA 107584
|||||||||||||||||| ||||||||||||||||||||| || |||| ||||| |||||
Sbjct 1145295 CAACTGTTCTGGGATCACCCGAGGGGACCAGGAAGCAGTGATCAAGGCTCTCCTGGACAA 1145354
Query 107585 CCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAG 107644
|||||| || ||||| |||||| |||| |||| | ||| | ||||||||||| |||||
Sbjct 1145355 CCTGGAGGTCAAGAAGAAGCGGGAGCCTTTCACAGACACTGACTACCTCAACATGACCAG 1145414
Query 107645 AGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGA 107704
|||||||||| || |||||| |||||| |||||||| |||||||||||| ||||||||
Sbjct 1145415 GGACTGTGAGCAGTTTAAGGCCAAAAGGAGGTTCATACGGTTCCCACTGAGCAAAGAAGA 1145474
Query 107705 GCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACG 107764
||||||| ||||| || ||||| |||||||||||||||||| |||||||||||||| |
Sbjct 1145475 ATTAGACTTTCCCATCGCTTACTCTATGGTGGTCCATGAGAAGGTTGAAAACTTTGAAAG 1145534
Query 107765 GCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTC 107824
|||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 1145535 GCTGCTGCGAGCTGTGTATGCCCCTCAGAACATATACTGTGTCCATGTGGATGAGAAGTC 1145594
Query 107825 CCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCAT 107884
|||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 1145595 CCCAGAAACTTTCAAAGAGGCAGTCAAGGCCATTATTTCATGCTTCCCGAATGTCTTCAT 1145654
Query 107885 GGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAA 107944
||||||||| ||||| | |||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1145655 GGCCAGTAAATTGGTTCGGGTGGTTTATGCCTCCTGGTCCAGGGTGCAGGCTGACCTGAA 1145714
Query 107945 CTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGG 108004
|||||||||||||||||||| |||| | ||||| ||||| ||||||||||| || |||||
Sbjct 1145715 CTGTATGGAAGACTTGCTCCGGAGCCCGGTGCCGTGGAAATACTTACTGAACACCTGCGG 1145774
Query 108005 GACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGG 108064
||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1145775 GACAGACTTTCCTATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAATGG 1145834
Query 108065 TAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCG 108124
||||||||||||||||| ||| ||||| |||||| |||||| | |||||||||||| |
Sbjct 1145835 GAAGAACAGTATGGAGTCAGAGATACCTACTGAGTACAAAAAGACTCGCTGGAAATATCA 1145894
Query 108125 CTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAA 108184
||| || ||||||||||| || | |||| |||||||||||||||||||||||||||
Sbjct 1145895 CTACGAAGTGACAGACACGTTGCAAGTAACCAACAAGATGAAGGACCCTCCCCCTGATAA 1145954
Query 108185 TTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGT 108244
|||||| |||||||| |||||||||||| ||||||| ||||||| |||| ||||||||||
Sbjct 1145955 TTTACCTATGTTCACGGGGAATGCCTATATTGTGGCTTCTCGAGGCTTTATCCAACATGT 1146014
Query 108245 CTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGA 108304
|||||| ||||| ||||||||| | ||| ||||||||| |||||||||||| ||||||||
Sbjct 1146015 CTTAGAGAACCCCAAATCCCAACGGCTGATTGAATGGGCCAAAGACACCTACAGCCCCGA 1146074
Query 108305 CGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCA 108364
|||||||||||||| |||||||||||||| || |||||||||||||||||||| |||
Sbjct 1146075 TGAACACCTCTGGGCTACCCTTCAGCGTGCACCATGGATGCCTGGCTCTGTTCCCTACCA 1146134
Query 108365 CCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCA 108424
|||||||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct 1146135 CCCCAAGTTTCACATCTCAGACATGACGGCCATCGCCAGGCTGGTCAAGTGGCAAGACCA 1146194
Query 108425 CGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGC 108484
||||||||| |||| |||||||| |||||||| || |||||||||||||| | | ||||
Sbjct 1146195 CGAGGGAGACATCAGTATGGGGGCACCTTATGCCCCTTGCTCTGGAATCCACCAGCGGGC 1146254
Query 108485 CATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGC 108544
|||| |||| ||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 1146255 TGTCTGTGTTTATGGGGCTGGGGACCTGCACTGGATTCTCCAGAACCATCACCTCTTGGC 1146314
Query 108545 AAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACG 108604
|||||||||||||| | |||||||||||| || || ||||||||||||||||| ||||
Sbjct 1146315 TAACAAGTTTGACCCCAAGGTGGATGATAATGTTCTTCAGTGCTTAGAAGAGTATTTACG 1146374
Query 108605 TCATAAGGCCATCTATGGGACTGAACTTTGAG----------------CTGC--ACTGTG 108646
||||||||||||||||| ||||||| |||| |||| | | |
Sbjct 1146375 CTATAAGGCCATCTATGGGGCTGAACTCTGAGATACACCTTGAGAGAACTGCTACCCGAG 1146434
Query 108647 GGCCAGGGACTG-TGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGA 108705
|| |||| || | || |||||||||||| ||| |||| || |||||||| || |||
Sbjct 1146435 GGGCAGGAACAGATGTAAACATGCCCAGGACGTGCTGGGACATTGTGGGGT-GGAGACCG 1146493
Query 108706 GGGCTGTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGCT 108748
||||| ||||||||| |||||||||| | | || || |||||
Sbjct 1146494 GGGCTCTGGAATCCACGGCATCCCCCGGTGGAAGGGGACTGCT 1146536
>seq170
Length=4243350
Score = 91.5 bits (100), Expect = 1e-13
Identities = 196/286 (69%), Gaps = 8/286 (3%)
Strand=Plus/Plus
Query 108276 GAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCT 108335
|| |||| ||||| || || ||||| ||||| | ||||||||||| ||||| | | |
Sbjct 890598 GAGTGGGCAAAAGATACATACAGCCCAGACGAGTATCTCTGGGCCACTATTCAGAG-GAT 890656
Query 108336 CCGTGGA-TGCCTGGCTC--TGTTCCTAGCCACCCCAAGTATCACATCTCAGACATG-AC 108391
| || | | || ||||| ||| | || | ||||| |||| ||||||||| ||
Sbjct 890657 GCCTGAAGTCCCAGGCTCACTGTCCTTAAGTTCT--AAGTACGACATGTCAGACATGCAC 890714
Query 108392 TGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCC 108451
| | || |||||| | || |||||||||||| || || || || || ||| || ||
Sbjct 890715 T-CTATTGCCAGGTTTGTTAAGTGGCAGTACTTTGAAGGTGACGTTTCCAAGGGCGCCCC 890773
Query 108452 TTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCT 108511
|| | || ||| || ||||| | | | | || ||| ||| ||||| ||| |
Sbjct 890774 CTACCCGCCGTGCAGCGGCATCCACGTGCGCTCTGTATGTGTTTTCGGAGCCGGTGACTT 890833
Query 108512 GTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557
| ||||||| || || || ||||| || || || |||||||||
Sbjct 890834 GAACTGGATGCTGCACGTGCACCACCTGTTTGCCAATAAGTTTGAC 890879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348130543054602
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |