Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21] 32,573 sequences; 2,004,063,690 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq251 235 4e-57 >seq251 Length=3596318 Score = 235 bits (260), Expect = 4e-57 Identities = 530/794 (67%), Gaps = 7/794 (1%) Strand=Plus/Minus Query 19984 ACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGAAATGAA 20043 || || || || || | || || || || ||||| | || || | | | ||| ||||| Sbjct 284958 ACGGGCACCGGCACCCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGCCTCAGAGATGAA 284899 Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| | | || || ||||| || || ||||| || ||| | || || || | ||| Sbjct 284898 TTTCCACTGCTCACAACCAAACGTGTTTTCTGGAAGGGTGTTTTGGAGGAATTGCTGTGG 284839 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGC 20163 ||||| || ||||| ||||| ||| ||||| || ||||| || || ||| | Sbjct 284838 TTTATCAAGGGATCCACAAACGCTAAGGAGCTGTCTTCCAAGGGAGTGAAAATCTGGGAC 284779 Query 20164 GCACATGGATCT--AAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGG 20221 || |||| || | || | || ||||| ||||| || | | ||| || | Sbjct 284778 GCCAATGGGTCCCGAGGCG--TCTTGGACAGCCTGGGATTCTCCACCAG---AGAAGGAG 284724 Query 20222 ATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGA 20281 || | || || || || | ||||| ||||| |||||||| || ||||| | || | | Sbjct 284723 ATCTAGGCCCAGTATACCGCTTTCAGTGGAGGCATTTTGGGGCCGAATACGAAGATACGG 284664 Query 20282 ACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAA 20341 | || |||||| || |||||||||| ||| | || || || | | | ||| |||| Sbjct 284663 ATTCAGATTATTCAGGCAAAGGAGTAGACCAACTGCAGAAGGTGACTGACACAATCAAAA 284604 Query 20342 CGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAA 20401 | ||||| || ||||||||||| || | || |||||||| | ||| | | || | | Sbjct 284603 CCAACCCTAATGACAGAAGAATCATCATGTGTGCCTGGAATCCAAAACACCTCCCGCTCA 284544 Query 20402 TGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGT 20461 ||| | || || || ||| || ||||| || ||||| | || ||| |||| | Sbjct 284543 CGGCCCTCCCGCCCTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACGGTGAGCTGTCCT 284484 Query 20462 GTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTT 20521 | || ||||| | || || | || ||||| ||||| || || ||||| || || || | Sbjct 284483 GCCAGCTGTATGAGCGGTCAGGAGACATGGGCCTGGGCGTGCCCTTCAACATCGCCAGCT 284424 Query 20522 ATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCC 20581 | | ||||| || || ||||||||||| | |||| | || | |||||| | || | Sbjct 284423 ACTCTCTGCTCACCTACATGATTGCACACATCACAGGCCTGAAGCCAGGTGACCTTGTAC 284364 Query 20582 ACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTTAA 20641 |||| | ||||| || || |||||||| ||||| | || || | ||| | ||| | Sbjct 284363 ACACTTTGGGAGATGCACACATTTACCTGAATCACACTGAGCCACTGAAAATGCAGCTTC 284304 Query 20642 CACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATATTAACG 20701 | ||| |||||| | ||||| | || || ||||| ||| | | | | | | Sbjct 284303 CGCGAGAACCAAGGCCTTTCCCGAAGCTCAAAATGCTTCGAAAAGTTGAGAAAACTGATG 284244 Query 20702 ATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAATGG 20761 || || ||||| || ||| | | ||||| || ||||| ||| | ||| ||||| Sbjct 284243 GCTTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAATCCTCATCCGACTATTAAAATGG 284184 Query 20762 AAATGTCTGTTTAA 20775 ||||| |||||||| Sbjct 284183 AAATGGCTGTTTAA 284170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399025530563485