Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq317 120 3e-22
>seq317
Length=3209840
Score = 120 bits (132), Expect = 3e-22
Identities = 108/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||| ||||| ||||||||||| || |||||||| | || ||||||| |||||| || |
Sbjct 2108762 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCCGGCATCAGTCCTCGCTTCT 2108703
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||| ||||||| ||||| || || |||||||| ||||| || ||||| ||||| |
Sbjct 2108702 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGG 2108643
Query 14014 CTATTAATCGTTCTCC 14029
||| | ||||||||
Sbjct 2108642 CTACAACACGTTCTCC 2108627
Score = 100 bits (110), Expect = 3e-16
Identities = 107/139 (77%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13582
|| || ||| |||| || | |||| ||| || | || | | || || || ||||| |
Sbjct 2110152 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTGGACATCACTCCCATCCT 2110094
Query 13583 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13642
||||| || | ||||| || |||||||||||||| || ||||||||||| ||||| ||
Sbjct 2110093 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 2110034
Query 13643 CATAAAATCAAATGGATTT 13661
|||||| ||||||||||||
Sbjct 2110033 CATAAAGTCAAATGGATTT 2110015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479532672748200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |