Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq317 114 1e-20
>seq317
Length=3209840
Score = 114 bits (126), Expect = 1e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
|||| ||||| ||||||||||| || |||||||| | || ||||||| |||||| || |
Sbjct 2108762 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCCGGCATCAGTCCTCGCTTCT 2108703
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
| | ||| ||||||| || || || || |||||||| ||||| || ||||| ||||| |
Sbjct 2108702 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGG 2108643
Query 13802 CTATTAGTCGTTCTCC 13817
||| | ||||||||
Sbjct 2108642 CTACAACACGTTCTCC 2108627
Score = 91.5 bits (100), Expect = 1e-13
Identities = 105/139 (76%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 13312 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13370
|| || ||| |||| || | |||| ||| || | || | | || || || ||||| |
Sbjct 2110152 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTGGACATCACTCCCATCCT 2110094
Query 13371 TTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13430
||||| || | ||||| || ||||| |||||||| || ||||||||||| ||||| ||
Sbjct 2110093 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 2110034
Query 13431 CATAAAATCGAATGGATTT 13449
|||||| || |||||||||
Sbjct 2110033 CATAAAGTCAAATGGATTT 2110015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478393936587720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |