Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21] 32,573 sequences; 2,004,063,690 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq251 163 4e-35 >seq251 Length=3596318 Score = 163 bits (180), Expect = 4e-35 Identities = 464/706 (66%), Gaps = 13/706 (2%) Strand=Plus/Minus Query 69926 AAGGGCGTCATCGAGGAGCTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCTG 69985 ||||| || | ||||| | ||||| | || ||||| || || || || |||||| Sbjct 284865 AAGGGTGTTTTGGAGGAATTGCTGTGGTTTATCAAGGGATCCACAAACGCTAAGGAGCTG 284806 Query 69986 AGCCGAAAGGGTGTACACATTTGGAGCGGCAACAGTAGTCGAAGCGTTTTGGATTCGCTC 70045 ||||| || | || ||| || ||| | ||| |||| ||||| || Sbjct 284805 TCTTCCAAGGGAGTGAAAATCTGGGACGCCAATGGGTCCCGAGGCGTCTTGGACAGCCTG 284746 Query 70046 GGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCAC 70105 || ||| || |||| ||| | ||||| || ||||| ||| | || ||||||||||| Sbjct 284745 GGATTCTCCACCAGAGAAG---GAGATCTAGGCCCAGTATACCGCTTTCAGTGGAGGCAT 284689 Query 70106 TCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTG 70165 | || || | || | ||| || |||| ||||| || | || || || ||| || Sbjct 284688 TTTGGGGCCGAATACGAAGATACGGATTCAGATTATTCAGGCAAAGGAGTAGACCAACTG 284629 Query 70166 CAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCA 70225 |||| | | |||||| |||| ||||| || | || || || ||| | ||||| | Sbjct 284628 CAGAAGGTGACTGACACAATCAAAACCAACCCTAATGACAGAAGAATCATCATGTGTGCC 284569 Query 70226 TGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGT--TTGGCTCAGT 70283 |||||||| | | | | | | ||| || || || || || || || || |||| Sbjct 284568 TGGAATCCAAAACACCTCCCGCTCACGGCCCTCCCGCCCTGCCA-TGCCCTTTGC-CAGT 284511 Query 70284 TTTAC-TCGT--ACGATGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGG 70340 | ||| | || ||| || | |||| ||| ||||| || || | ||||||| Sbjct 284510 TCTACGTGGTGAACGGTG---AGCTGTCCTGCCAGCTGTATGAGCGGTCAGGAGACATGG 284454 Query 70341 GCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACA 70400 |||| || || ||||| ||||| || ||||| ||| || | || |||||||||| |||| Sbjct 284453 GCCTGGGCGTGCCCTTCAACATCGCCAGCTACTCTCTGCTCACCTACATGATTGCACACA 284394 Query 70401 TTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAA 70460 | || |||||||| | || | |||||||| | || || || ||| | || | | Sbjct 284393 TCACAGGCCTGAAGCCAGGTGACCTTGTACACACTTTGGGAGATGCACACATTTACCTGA 284334 Query 70461 ATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGG 70520 |||||| |||||| | || |||| || || || || || ||||| || ||||| Sbjct 284333 ATCACACTGAGCCACTGAAAATGCAGCTTCCGCGAGAACCAAGGCCTTTCCCGAAGCTCA 284274 Query 70521 AGTTTGCTCGTAAAGTTGAAAATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAG 70580 | | ||| |||||||| || | ||| | || ||| ||||| ||| || ||| Sbjct 284273 AAATGCTTCGAAAAGTTGAGAAAACTGATGGCTTCAAGGCTGAAGACTTTCAGATTGAAG 284214 Query 70581 GTTACGATCCATACCCTAAGATTCCCATGGTTCTGGCTGTTTAGAG 70626 | ||| |||| | || | ||| |||| |||||||||| || Sbjct 284213 GCTACAATCCTCATCCGACTATTAAAATGGAAATGGCTGTTTAAAG 284168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740757468483480