Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq279 111 1e-19
>seq279
Length=9007507
Score = 111 bits (122), Expect = 1e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232
|||||||||| || || || || || ||||| || || || |||||||| |||| || |
Sbjct 4426777 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGGCCAGGCATAAGACCTCTCTTCT 4426718
Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292
| | |||||||||||||||||| || || || || || |||||||| || || ||||| |
Sbjct 4426717 TCAGCCAAAATATAGCAGCAAAAGAGCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGG 4426658
Query 13293 CTATCAACCTTTCACC 13308
| | || |||||| ||
Sbjct 4426657 CCACCACCCTTTCCCC 4426642
Score = 82.4 bits (90), Expect = 7e-11
Identities = 78/97 (80%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 12970 TTCTAGTAA-CAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCA 13028
|||| |||| ||| |||||||| ||||| || || ||||||||||| ||| |||| ||||
Sbjct 4432129 TTCT-GTAAGCAACCTGTCAGCTACAAATTCAATATACTGTTTCATCAAAACACAATTCA 4432071
Query 13029 TTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAA 13065
|||| || | || |||| |||||||||||||||
Sbjct 4432070 TTCCAATGAGGCCAACTGGCAAAGCTTCTGTTAAAAA 4432034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430811307125346
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |