Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq251 226 2e-54
seq25 109 4e-19
>seq251
Length=3596318
Score = 226 bits (250), Expect = 2e-54
Identities = 399/578 (69%), Gaps = 5/578 (1%)
Strand=Plus/Plus
Query 25388 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTA 25447
|||||||| || || || | | ||||| | ||||| || || ||||| ||||||
Sbjct 284282 GGGAAAGGC-CTTGGTTCTCGCGGAAGCTGCATTTTCAGTGGCTCAGTGTGATTCAGGTA 284340
Query 25448 GACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGC 25507
| ||| || ||||||| |||||| |||| || || || | || || || | || ||
Sbjct 284341 AATGTGTGCATCTCCCAAAGTGTGTACAAGGTCACCTGGCTTCAGGCCTGTGATGTGTGC 284400
Query 25508 CATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTC 25567
|||||||| ||||| ||| |||||||||||||||| ||||| || || | |||||||
Sbjct 284401 AATCATGTAGGTGAGCAGAGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGT- 284459
Query 25568 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACA 25627
| || |||| || || ||||| || || ||||| ||| |||||| ||||| || |
Sbjct 284460 CTCCTGACCGCTCATACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAA 284519
Query 25628 TGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGA 25687
|| | ||| || || || || | || | || ||| || |||||||| |||| ||
Sbjct 284520 GGGCATGGCAGGGCGGGAGGGCCGTGAGCGGGAGGTGTTTTGGATTCCAGGCACACATGA 284579
Query 25688 TGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTGCAGCTGATCCA 25747
|||| | ||||| | |||||| |||| || | || ||||| || || |
Sbjct 284580 TGATTCTTCTGTCATTAGGGTTGGTTTTGATTGTGTCAGTCACCTTCTGCAGTTGGTCTA 284639
Query 25748 CCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACT 25807
| || | || || || |||| | | || ||| || || || |||| ||||||||
Sbjct 284640 CTCCTTTGCCTGAATAATCTGAATCCGTATCTTCGTATTCGGCCCCAAAATGCCTCCACT 284699
Query 25808 GGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCA 25867
| || | ||| || || ||||| |||| |||| ||| || ||| | ||||
Sbjct 284700 GAAAGCGGTATACTGGGCCTAGATCTC---CTTCTCTGGTGGAGAATCCCAGGCTGTCCA 284756
Query 25868 AAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGG 25927
| | | ||| ||| ||||||||||||||||| || || ||||| || ||||| || |
Sbjct 284757 AGACGCCTCGGGACCCATTGGCGTCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAG 284816
Query 25928 AGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCC 25965
||||||||| || ||| |||||||||| ||| ||
Sbjct 284817 CGTTTGTGGATCCCTTGATAAACCACAGCAATTCCTCC 284854
>seq25
Length=14465811
Score = 109 bits (120), Expect = 4e-19
Identities = 125/168 (74%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
||| || |||| || || || |||| |||||| || || ||||| ||||| ||||| ||
Sbjct 2985527 CATATCTTTGTATTCGGCCCCAAAATGCCTCCATTGAAAGCCGTAAACCGGGCCTAGATC 2985586
Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892
||| ||||| ||| || ||| | ||||| ||||||| ||| |||||||||||
Sbjct 2985587 TCCTTCTTCTCTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTGGCGTC 2985646
Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940
|||||| || || ||||| || ||||| || | ||||||||| ||
Sbjct 2985647 CCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGATCC 2985694
Score = 100 bits (110), Expect = 2e-16
Identities = 113/150 (75%), Gaps = 1/150 (1%)
Strand=Plus/Plus
Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565
|| |||||| | ||||| || |||||||||||||||| ||||| || || | ||||||
Sbjct 2982299 GCGATCATGCAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATG 2982358
Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625
| | ||||||| |||||| ||||| || || ||||| ||| |||||| ||||| ||
Sbjct 2982359 T-CTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCA 2982417
Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
| || || ||| || || || || || ||
Sbjct 2982418 AAGGGCGTGGCAGGGCGGGAGGGCCATGAG 2982447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340002571006329
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |