Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq721 89.7 5e-13
seq279 86.0 7e-12
seq317 84.2 2e-11
>seq721
Length=2137136
Score = 89.7 bits (98), Expect = 5e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 130665 GTTTCAACTTTAACAAGAGTTGCTCCCAATGAAGTACAAAATGTGTTGCCAAATGTCCAA 130724
||||||| | | ||||| ||| | || || | ||| || | | || |||||||||
Sbjct 281778 GTTTCAAACTGAGCAAGACCAGCTTCTAACGAGGCACAGAACATCTGGCTGAATGTCCAA 281837
Query 130725 TTTTTTGAATCTTCAGAAAAGTAAAAGCATTTATATCCAAATCCAATCCATCCCTTTGGG 130784
|| |||| ||||||||||| |||||||| ||| |||||||||||||||| | ||||
Sbjct 281838 TTCCTTGAGTCTTCAGAAAAATAAAAGCACTTACGCCCAAATCCAATCCATCATTCTGGG 281897
Query 130785 CAAGTAACA 130793
|| |||||
Sbjct 281898 CAGATAACA 281906
>seq279
Length=9007507
Score = 86.0 bits (94), Expect = 7e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 21126 TTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTT 21185
||||||| || |||||||| | ||| ||||||||| ||| | ||||| | | |
Sbjct 4436217 TTTAAAAGTCTGCATCTAAGGTGAAGACATTATCTGTAGTTTCCGCCATAACTGCAAAGC 4436158
Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245
||||| || ||||| ||| || || |||||||| || || || || || || ||
Sbjct 4436157 GCTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCCTCTAAAGAAATGTTTT 4436098
Query 21246 CCATAAAATCAAATGGATTTTC 21267
||||||||||||| ||||||||
Sbjct 4436097 CCATAAAATCAAAGGGATTTTC 4436076
>seq317
Length=3209840
Score = 84.2 bits (92), Expect = 2e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 21127 TTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTT 21186
||| || |||||||| || | ||| ||| ||| | | ||||| | |||||| |
Sbjct 2110153 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTGGACATCACTCCCATCCT 2110094
Query 21187 TTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTC 21246
||||| || | ||||| || || || || || ||||| ||||||| ||| ||| ||
Sbjct 2110093 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 2110034
Query 21247 CATAAAATCAAATGGATTTTC 21267
|||||| ||||||||||||||
Sbjct 2110033 CATAAAGTCAAATGGATTTTC 2110013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531684229940520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |