Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21] 32,573 sequences; 2,004,063,690 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq99 98.7 8e-16 >seq99 Length=2554289 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| | ||| || |||||| || || || || Sbjct 1822066 GTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 1822125 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||| ||||| |||||||| || || ||||| || Sbjct 1822126 GCGAAGATGAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1822185 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| | | || || |||| ||| | || ||||||||||| || Sbjct 1822186 ACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1822245 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 1822246 TTCACGAAGATCTGCAT 1822262 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| | ||| || |||||| || || || || Sbjct 1822294 GTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 1822353 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||| ||||| |||||||| || || ||||| || Sbjct 1822354 GCGAAGATGAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1822413 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| | | || || |||| ||| | || ||||| |||| || Sbjct 1822414 ACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTC 1822473 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 1822474 TTCACGAAGATCTGCAT 1822490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419967613601676