Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq317 87.8 3e-12
seq279 84.2 4e-11
>seq317
Length=3209840
Score = 87.8 bits (96), Expect = 3e-12
Identities = 96/125 (77%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767
||||||||| |||| || || || |||||||| || || | || || || || ||||||
Sbjct 2108639 GTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGG 2108698
Query 42768 CTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826
|||||| || ||| | |||||| || ||||| || || || ||||| || ||||| ||
Sbjct 2108699 CTCAAGAAGCGAGGACT-GATGCCGGGCCTCACATTTTCCAATGAACTTATTAGCAGAGA 2108757
Query 42827 CGAGG 42831
|||||
Sbjct 2108758 CGAGG 2108762
>seq279
Length=9007507
Score = 84.2 bits (92), Expect = 4e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| || ||| |||| |||||| | || || || || || |||||||| ||| | || ||
Sbjct 4426642 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTGGAAGGAATTTTCTTCTCAGGCTCTTTTGCT 4426701
Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
| || || ||||| ||| ||| |||| | ||||| || ||||| || || || |||||
Sbjct 4426702 GCTATATTTTGGCTGAAGAAGAGAGGTCTT-ATGCCTGGCCTCACTTTTTCCAATGAACT 4426760
Query 42815 CATCAGCAGGGACGA 42829
||||||||| || ||
Sbjct 4426761 CATCAGCAGAGATGA 4426775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943954700490480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |