Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq251 217 1e-51
seq25 105 6e-18
>seq251
Length=3596318
Score = 217 bits (240), Expect = 1e-51
Identities = 450/669 (67%), Gaps = 3/669 (0%)
Strand=Plus/Plus
Query 20153 CGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAAC 20212
|||| ||||||| |||||||| | || | ||| ||||| |||||||||||
Sbjct 284300 CGCGGAAGCTGCATTTTCAGTGGCTCAGTGTGATTCAGGTAAATGTGTGCATCTCCCAAA 284359
Query 20213 GTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGG 20272
||||| | || || || || | || || || | || |||| ||| || || | ||
Sbjct 284360 GTGTGTACAAGGTCACCTGGCTTCAGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAGA 284419
Query 20273 GAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGC 20332
|| |||||||| ||||| || || || |||| ||||||||||| |||| || |||||||
Sbjct 284420 GAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCTCCTGACCGCTCATACAGC 284479
Query 20333 TGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGC 20392
|| ||||| |||||||||| | || || || || || | || |||||||| ||
Sbjct 284480 TGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAAGGGCATGGCAGGGCGGGAGG 284539
Query 20393 GCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGA 20452
||| | | || | || || ||||| |||||||| ||||||||||| || | ||
Sbjct 284540 GCCGTGAGCGGGAGGTGTTTTGGATTCCAGGCACACATGATGATTCTTCTGTCATTAGGG 284599
Query 20453 TTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCA 20512
|| |||| ||| || | | | || |||||| | || | ||||| ||| ||
Sbjct 284600 TTGGTTTTGATTGTGTCAGTCACCTTCTGCAGTTGGTCTACTCCTTTGCCTGAATAATCT 284659
Query 20513 GCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCC 20572
| ||||| || |||| | |||||||| ||||||||||| || | ||| || || ||
Sbjct 284660 GAATCCGTATCTTCGTATTCGGCCCCAAAATGCCTCCACTGAAAGCGGTATACTGGGCCT 284719
Query 20573 AAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTT 20632
| ||| || || |||| | | || | | | ||| || | | ||| |||||
Sbjct 284720 AGATCTCCTTC---TCTGGTGGAGAATCCCAGGCTGTCCAAGACGCCTCGGGACCCATTG 284776
Query 20633 TTGTCCCATATCTTGACTCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGA 20692
|||||| || || ||||| | || |||||| | | || || ||||| | |
Sbjct 284777 GCGTCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGATCCCTTGATA 284836
Query 20693 AACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGA 20752
||||| |||| || | || || || ||| || || || || || || || | |||
Sbjct 284837 AACCACAGCAATTCCTCCAAAACACCCTTCCAGAAAACACGTTTGGTTGTGAGCAGTGGA 284896
Query 20753 AAGTGGTCCCGCAGACTATACCTGGCCTGCATGCCAAATAGAGAGAGGGTGCCTATGCCG 20812
|| | || | || || || | ||||||||||| || | || |||||||| ||||
Sbjct 284897 AATTCATCTCTGAGGCTGTAGCGCGCCTGCATGCCGAACACCGACAGGGTGCCGGTGCCC 284956
Query 20813 GTGCGGTCG 20821
|||| ||||
Sbjct 284957 GTGCAGTCG 284965
>seq25
Length=14465811
Score = 105 bits (116), Expect = 6e-18
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 20270 AGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATAC 20329
||||| |||||||| ||||| || || || |||| |||||||||||||||| ||| |||
Sbjct 2982317 AGGGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCTCCCGACCGCTGGTAC 2982376
Query 20330 AGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGA 20389
||||| ||||| |||||||||| | || || || || || | ||| ||||||||
Sbjct 2982377 AGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAAGGGCGTGGCAGGGCGGG 2982436
Query 20390 AGCGCCAT 20397
|| |||||
Sbjct 2982437 AGGGCCAT 2982444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441193089547320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |