Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq99 127 2e-24
>seq99
Length=2554289
Score = 127 bits (140), Expect = 2e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || ||||||||||| | | ||||| | ||||| |||||||||||
Sbjct 1816901 GTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 1816960
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||||| ||||||||| ||||| || || || || || || || || |||
Sbjct 1816961 GCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 1817020
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | || |||| || ||||| || | || | ||||||||| ||||| ||
Sbjct 1817021 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTC 1817080
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| ||||| || ||||||||
Sbjct 1817081 TTCACGAAGATCTGCATTTT 1817100
Score = 122 bits (134), Expect = 9e-23
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || ||||||||||| | | ||||| | ||||| |||||||||||
Sbjct 1822294 GTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 1822353
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||||||||||||||| ||||| || ||||| || || || || || |||
Sbjct 1822354 GCGAAGATGAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1822413
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || || | | ||||| || | || | ||||||||| ||||| ||
Sbjct 1822414 ACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTC 1822473
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| ||||| || ||||||||
Sbjct 1822474 TTCACGAAGATCTGCATTTT 1822493
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || ||||||||||| | | ||||| | ||||| |||||||||||
Sbjct 1822066 GTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 1822125
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||||||||||||||| ||||| || ||||| || || || || || |||
Sbjct 1822126 GCGAAGATGAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1822185
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || || | | ||||| || | || | |||||||||||||| ||
Sbjct 1822186 ACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1822245
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 1822246 TTCACGAAGATCTGCAT 1822262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499441363374120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |