Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq469 96.9 2e-15
>seq469
Length=2995260
Score = 96.9 bits (106), Expect = 2e-15
Identities = 155/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 39502 AAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGT 39561
|||||||| ||||| |||| |||| ||| || || || || || || | || |||
Sbjct 1051339 AAACGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 1051398
Query 39562 TCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCT 39621
|||| |||| ||||||||| |||| || || | |||||| || | ||| | ||| ||
Sbjct 1051399 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 1051458
Query 39622 TTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCCACGTCCAAAG 39679
||||| || || || | || | | ||||| || ||| |||| |||| |
Sbjct 1051459 TTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCT--CCACCTCCAGGG 1051516
Query 39680 TAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
| || || |||||||| || || || |||||||||||||||
Sbjct 1051517 TGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1051557
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| |||| | |||||| |||| |||| ||| || || || || || || || |
Sbjct 1051557 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1051616
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
|| ||| |||| |||| ||||||||| |||| || || | |||||| || | |||
Sbjct 1051617 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 1051676
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCC 39669
| ||| || ||||| || || || | || | | ||||| || ||| ||
Sbjct 1051677 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCT--CC 1051734
Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| |||| || || || |||||||| || || || |||||||||||||||
Sbjct 1051735 ACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1051785
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| |||| | |||||| |||| |||| ||| || || || || || || || |
Sbjct 1051785 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1051844
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
|| ||| |||| |||| ||||||||| |||| || || | |||||| || | |||
Sbjct 1051845 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 1051904
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCC 39669
| ||| || ||||| || || || | || | | ||||| || ||| ||
Sbjct 1051905 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCT--CC 1051962
Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| |||| || || || |||||||| || || || |||||||||||||||
Sbjct 1051963 ACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052013
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| |||| | |||||| |||| |||| ||| || || || || || || || |
Sbjct 1052013 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1052072
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
|| ||| |||| |||| ||||||||| |||| || || | |||||| || | |||
Sbjct 1052073 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 1052132
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCC 39669
| ||| || ||||| || || || | || | | ||||| || ||| ||
Sbjct 1052133 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCT--CC 1052190
Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| |||| || || || |||||||| || || || |||||||||||||||
Sbjct 1052191 ACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052241
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| |||| | |||||| |||| |||| ||| || || || || || || || |
Sbjct 1052374 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1052433
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
|| ||| |||| |||| ||||||||| |||| || || | |||||| || | |||
Sbjct 1052434 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 1052493
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCC 39669
| ||| || ||||| || || || | || | | ||||| || ||| ||
Sbjct 1052494 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCT--CC 1052551
Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| |||| || || || |||||||| || || || |||||||||||||||
Sbjct 1052552 ACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052602
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| |||| | |||||| |||| |||| ||| || || || || || || || |
Sbjct 1052602 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1052661
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
|| ||| |||| |||| ||||||||| |||| || || | |||||| || | |||
Sbjct 1052662 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 1052721
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCC 39669
| ||| || ||||| || || || | || | | ||||| || ||| ||
Sbjct 1052722 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCT--CC 1052779
Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| |||| || || || |||||||| || || || |||||||||||||||
Sbjct 1052780 ACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347231700022109
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |