Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq469 138 1e-27
seq99 134 1e-26
seq119 113 5e-20
seq615 109 5e-19
seq205 107 2e-18
seq164 96.9 3e-15
>seq469
Length=2995260
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | ||||| || ||||||||| | || || ||| |||
Sbjct 1051556 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 1051497
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 1051496 GACACCATCGAGAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 1051438
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || ||||||||||| || | ||||||||| ||||||||
Sbjct 1051437 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 1051378
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| |||||| | || ||||| ||||| |||||||| || || ||
Sbjct 1051377 CATCCAGAAGGAATCCACTCTGCACTTGGTCCTGCGTTTAAGGGGAGG 1051330
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | ||||| || ||||||||| | || || ||| |||
Sbjct 1051784 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 1051725
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 1051724 GACACCATCGAGAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 1051666
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || ||||||||||| || | ||||||||| ||||||||
Sbjct 1051665 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 1051606
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || ||||| |||| |||||| | ||||| |||
Sbjct 1051605 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGAGGGGGC 1051557
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | ||||| || ||||||||| | || || ||| |||
Sbjct 1052012 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 1051953
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 1051952 GACACCATCGAGAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 1051894
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || ||||||||||| || | ||||||||| ||||||||
Sbjct 1051893 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 1051834
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || ||||| |||| |||||| | ||||| |||
Sbjct 1051833 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGAGGGGGC 1051785
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | ||||| || ||||||||| | || || ||| |||
Sbjct 1052240 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 1052181
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 1052180 GACACCATCGAGAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 1052122
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || ||||||||||| || | ||||||||| ||||||||
Sbjct 1052121 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 1052062
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || ||||| |||| |||||| | ||||| |||
Sbjct 1052061 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGAGGGGGC 1052013
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | ||||| || ||||||||| | || || ||| |||
Sbjct 1052601 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 1052542
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 1052541 GACACCATCGAGAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 1052483
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || ||||||||||| || | ||||||||| ||||||||
Sbjct 1052482 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 1052423
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || ||||| |||| |||||| | ||||| |||
Sbjct 1052422 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGAGGGGGC 1052374
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | ||||| || ||||||||| | || || ||| |||
Sbjct 1052829 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 1052770
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 1052769 GACACCATCGAGAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 1052711
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || ||||||||||| || | ||||||||| ||||||||
Sbjct 1052710 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 1052651
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || ||||| |||| |||||| | ||||| |||
Sbjct 1052650 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGAGGGGGC 1052602
>seq99
Length=2554289
Score = 134 bits (148), Expect = 1e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| || || | |||||||| ||||||||| | || || ||| |
Sbjct 1822493 AAAATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCT 1822434
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| ||||| | | | |||| | || | || |||| || || || || || || | ||
Sbjct 1822433 AGCGACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCTGA 1822375
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||||||||| | ||| ||||| |||||||| || | ||||| || || ||
Sbjct 1822374 CCAGCAGCGGCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTA 1822315
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| ||||| |||| ||||| |||| |||||| |||| || ||
Sbjct 1822314 CAACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGGGGTGG 1822264
Score = 129 bits (142), Expect = 6e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| || || | |||||||| ||||||||| | || || ||| ||
Sbjct 1817100 AAAATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCC 1817041
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | || | || |||| || || ||||| || || | |||
Sbjct 1817040 AGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCTGAC 1816981
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||| ||||||| | ||| ||||| |||||||| || | ||||| || || |||
Sbjct 1816980 CAGCAGAGGCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 1816921
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||||| ||||| |||| ||||| |||| || ||| |||| || |||
Sbjct 1816920 AACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 1816870
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| | || || ||| | | |
Sbjct 1822262 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCTAGC 1822203
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || || || || || || | |||||
Sbjct 1822202 GACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCA 1822144
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||||||||| | ||| ||||| |||||||| || | ||||| || || |||||
Sbjct 1822143 GCAGCGGCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 1822084
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||| ||||| |||| |||||| |||| || ||
Sbjct 1822083 CATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGGGGTGG 1822036
>seq119
Length=227305
Score = 113 bits (124), Expect = 5e-20
Identities = 166/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| | || || || || || | |||||| ||||||||| | || || ||| |||
Sbjct 86859 ATGCAGGTCTTTGTGAAGACCCTGATGGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 86800
Query 38304 GACAGCG-TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || || | | |||| ||||||| ||||| ||||| || || | |||||
Sbjct 86799 GACACCACTGAGAATG-TCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCA 86741
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC-GACTACA 38421
|||| || |||| ||| ||||||||||||| || | ||||| | || | |||||||
Sbjct 86740 GCAGCATCTGATTTTTGCGAGCAAACAGCTGGAGGATGGTCGCACTC-CATCAGACTACA 86682
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
| || || || || | || ||||| |||||||| | | || |||||||
Sbjct 86681 ATATTCAGAAAGAGTCCACCCTGCACTTGGTGCTTCATCTGCAAGGCGGC 86632
>seq615
Length=2269971
Score = 109 bits (120), Expect = 5e-19
Identities = 166/233 (71%), Gaps = 5/233 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || |||||||| ||||||||| |||| || ||| |||
Sbjct 1647328 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 1647387
Query 38304 GACAGCG-TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || || | | |||| ||||||| ||||| ||||| || || | || ||
Sbjct 1647388 GACACCACTGAGAATG-TCAAAGCTAAAATCCAGGACAAGGAGGGCATCCCACCTGATCA 1647446
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| | |||||||||||| || || | |||| || ||||||||
Sbjct 1647447 GCAGCGTCTGATTTTTGTGGGCAAACAGCTAGAGGATGGCTGCACTCTGTCAGACTACAA 1647506
Query 38423 CA---TCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
| | || ||||| | || ||||| || |||| ||| || |||| ||||
Sbjct 1647507 TATTCTTCAGAAGGAGTCCACCCTGCACTTAGTGCGTCGTCTGTGAGGTGGCC 1647559
>seq205
Length=8045950
Score = 107 bits (118), Expect = 2e-18
Identities = 167/230 (73%), Gaps = 9/230 (4%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || |||||||| |||||||| ||| || ||| |||
Sbjct 434893 ATGCAGATCTTTGTGAAGACCCTAACGGGCAAGGCCATCACCCTCGG-GTTGAGCCCAGT 434835
Query 38304 GACAGCG-TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | || || | | |||| |||| || ||||| ||||| || |||||| ||||
Sbjct 434834 GACACCACTGAGAATG-TCAAAGCTAAAACCCAAGACAAGGAGGGCAT-CCCGCCTGACC 434777
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| |||| || |||| ||||||||||||||||| |||| | ||| || ||||||
Sbjct 434776 AGCAGCATCTGATTTTTGCGGGCAAACAGCTGGAGGACGGGGACACTCTGTCACACTACA 434717
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||| |||| | | ||||| |||||||| || |||||||||||
Sbjct 434716 GTATCC---AGGAGTCCGCCCTGCACTTGGTGCT-TGTCTGAGAGGCGGC 434671
>seq164
Length=6526486
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|| || || || || || || || || ||||| || |||||| |||| || ||| ||||
Sbjct 3962499 ATACAGATCTTTGTGAAGACCCTGACAGGCAAGACTATCACCCTCGAGGTTGAGTCCACT 3962440
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | |||| | |||| ||||| ||||| || || | |||||
Sbjct 3962439 GACACCAATAAGAATGTCAAAGCTACAATCTAAGACAAGGAGGGCATCCCACCTGACCAG 3962380
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|||| ||||||| | |||| ||||||||||| || | || || || || ||| |
Sbjct 3962379 CAGCATCTCATTTTCACGGGGAAACAGCTGGAGGATGGCCGTACTCTGTCAGATTACGAT 3962320
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
| || || || | || |||||| ||||| |||||| ||||||||
Sbjct 3962319 GTTCAGAAAGAGTCCACCTTGCATTCAGTGCTTCGTTTGGGAGGCGGC 3962272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499969148392320
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