Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq173 123 1e-22
seq158 113 2e-19
>seq173
Length=1059392
Score = 123 bits (136), Expect = 1e-22
Identities = 339/516 (66%), Gaps = 5/516 (1%)
Strand=Plus/Plus
Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150
||||| || | |||||| |||||| | |||||| | | | | ||||| | || |||
Sbjct 163884 AACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTAGTGCAA 163943
Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210
||| | ||| | | ||| | | ||| | ||| || ||| |||||| | |
Sbjct 163944 TCAGATATGAAACTTTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTAATG 164003
Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270
|| || ||||| || | ||| |||| ||||| ||||| || |||||||| ||
Sbjct 164004 GTGTCCTACAAAGGGGAGAAAAAAGCTTTCTACCCTGAGGAAATCTCTTCTATGGTACTG 164063
Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTC-CAGTTACTGATGCAGTAAT 451329
||||| ||||| || || || || | | |||| | | | || || |||| || ||
Sbjct 164064 ACTAAGATGAAGGAGACTGCTGAGGCTTTT-TTGGGCCACACTGTCACCAATGCTGTGAT 164122
Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389
|| || || || ||||||||||| | || || || || || || |||||||| ||
Sbjct 164123 CACCGTGCCAGCCTATTTCAATGACTCTCAGCGCCAGGCCACCAAGGATGCAGGTGTGAT 164182
Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
||| ||| | || || || ||||||| || ||||| ||||| ||||| | || |||||
Sbjct 164183 TGCAGGTCTCAACGTGCTAAGAATTATCAACGAACCCACAGCTGCTGCCATTGCTTATGG 164242
Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509
||| ||| | || | ||| | | | || | |||||| | ||||||||
Sbjct 164243 CTTAGATAAAGC---AGGTCAGGGAGAGCGACACGTCCTAATCTTTGATCTGGGTGGAGG 164299
Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569
|| |||| || |||| | || || || ||| | ||||| || ||||| ||
Sbjct 164300 CACATTTGATGTGTCCATACTGACCATAGATGACGGGATTTTTGAGGTGAAGGCCACGGC 164359
Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
||| || || || || || || || || |||| ||
Sbjct 164360 TGGGGACACGCACCTGGGTGGGGAGGACTTTGACAA 164395
>seq158
Length=11426268
Score = 113 bits (124), Expect = 2e-19
Identities = 237/353 (67%), Gaps = 3/353 (1%)
Strand=Plus/Plus
Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267
|| ||||| || || || || || |||| || ||| || || | ||||| |||||
Sbjct 5577324 CAGGTAAAATACAAGGGAGAGACAAAAAGCTTGTATCCAGAGGAGGTGTCATCCGTGGTT 5577383
Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327
| || || ||| | ||||| |||||| || |||| | ||||| |||| |
Sbjct 5577384 TTGACAAAGATGGAGGAAACTGCAGAAGCCTACCTTGGGAAGACTGTTACCAATGCTGAT 5577443
Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387
| || || ||| ||||||||||||| | || | || || || |||||||| ||| |
Sbjct 5577444 GTCACAGTACCCACTTATTTCAATGACTCTCAGCATCAGGCTACCAAAGATGCTGGAACT 5577503
Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447
||||||||| | || || ||| |||| |||||||| || || || |||||| | || ||
Sbjct 5577504 ATTGCTGGTCTCAAAGTACTTAGAATCATTAATGAGCCAACTGCTGCTGCTATTGCTAAT 5577563
Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507
|| ||| | ||| | || |||| |||| | | | ||||| || |||||
Sbjct 5577564 GGCTTAG---ACGAAAAGGTTGGAGCTGAAAGAAATGTGCTGATCTTTGACTTGGGTGGT 5577620
Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560
|| ||| |||| || ||| | ||||| ||||| | ||||| || ||
Sbjct 5577621 GGCACTTTTGATGTGTCAACCCTTACTATTGAGGATGGAATCTTTGATGTCAA 5577673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974893850595884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |