Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21] 32,573 sequences; 2,004,063,690 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq792 91.5 2e-13 >seq792 Length=930950 Score = 91.5 bits (100), Expect = 2e-13 Identities = 167/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 || ||||||||||| |||||||| |||| || |||||| |||| || || | ||| Sbjct 139007 ATCATGATTACATACCCATCTACCAATGGAGTGTTTGAAGAGAACACTGGAGAGGTGTGT 139066 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | | | || || | || || ||||| || || || || |||||| | || || ||| Sbjct 139067 GACCTGATCCACAAGCACGGAGGGCAGGTCTACCTGGACGGGGCAAATATGAACGCTCAG 139126 Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726 || || | || |||| ||| | ||||| | || ||||| | || ||| Sbjct 139127 GTGGGGATCTGTTGTCCTGCAGACTTTGGGTCTGATGTCTCACACCTAAATCTTCACAAG 139186 Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAA 159786 || ||||| ||||| |||||||| || || || ||| | || || ||||| || ||| Sbjct 139187 ACCTTCTGCATTCCCCATGGAGGAGGTGGCCCCGGCATGGGGCCCATTGGAGTGAAGAAA 139246 Query 159787 CATCT 159791 ||||| Sbjct 139247 CATCT 139251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587811767603280