Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq469 140 2e-28
seq119 105 4e-18
seq615 96.9 2e-15
seq99 87.8 1e-12
seq205 86.0 4e-12
seq89 86.0 4e-12
seq164 82.4 5e-11
>seq469
Length=2995260
Score = 140 bits (154), Expect = 2e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|||||||| || | || |||||||| | ||| ||| ||||| ||||| ||||| ||
Sbjct 1051330 CCTCCCCTTAAACGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 1051389
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| ||||||||||| |||||||| || | | ||||||||| | ||
Sbjct 1051390 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 1051449
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||||||||| |||||| |||||| | || | |||| || ||| ||
Sbjct 1051450 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 1051509
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | ||| ||||| || ||||| | |||||||| |||||||||||
Sbjct 1051510 TCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 1051556
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || |||| |||
Sbjct 1051576 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1051635
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | ||||||||| | || | |||||||||||
Sbjct 1051636 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 1051695
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 1051696 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 1051755
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| | |||||||| |||||||||||
Sbjct 1051756 CCCGTCAAGGTCTTCACGAAGATCTGCAT 1051784
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || |||| |||
Sbjct 1051804 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1051863
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | ||||||||| | || | |||||||||||
Sbjct 1051864 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 1051923
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 1051924 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 1051983
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| | |||||||| |||||||||||
Sbjct 1051984 CCCGTCAAGGTCTTCACGAAGATCTGCAT 1052012
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || |||| |||
Sbjct 1052032 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1052091
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | ||||||||| | || | |||||||||||
Sbjct 1052092 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 1052151
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 1052152 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 1052211
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| | |||||||| |||||||||||
Sbjct 1052212 CCCGTCAAGGTCTTCACGAAGATCTGCAT 1052240
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || |||| |||
Sbjct 1052393 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1052452
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | ||||||||| | || | |||||||||||
Sbjct 1052453 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 1052512
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 1052513 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 1052572
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| | |||||||| |||||||||||
Sbjct 1052573 CCCGTCAAGGTCTTCACGAAGATCTGCAT 1052601
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || |||| |||
Sbjct 1052621 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1052680
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | ||||||||| | || | |||||||||||
Sbjct 1052681 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 1052740
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 1052741 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 1052800
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| | |||||||| |||||||||||
Sbjct 1052801 CCCGTCAAGGTCTTCACGAAGATCTGCAT 1052829
>seq119
Length=227305
Score = 105 bits (116), Expect = 4e-18
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| ||||||||||| || ||||| || | | || |||| |||
Sbjct 86651 ACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGATGGAGTGCGACCATCCTCC 86710
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| | ||||| || || | |||||||| | || | |||||||||||
Sbjct 86711 AGCTGTTTGCTCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 86770
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
|| || |||||| || || | | |||| || |||||| || | ||| ||||| |
Sbjct 86771 ATTTTAGCTTTGAC--ATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCT 86828
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| ||| | || ||||||||||||| ||||||
Sbjct 86829 TGCCCATCAGGGTCTTCACAAAGACCTGCAT 86859
>seq615
Length=2269971
Score = 96.9 bits (106), Expect = 2e-15
Identities = 134/186 (72%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 34798 GAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTC 34857
|||| || ||||| || || | | |||| || |||||||| || |||| || || |
Sbjct 1647511 GAATATTGTAGTCTGACAGAGTGCAGCCATCCTCTAGCTGTTTGCCCACAAAAATCAGAC 1647452
Query 34858 GTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTA--T 34915
| ||||| || | || | ||||||||||| || || |||||| || || |
Sbjct 1647451 GCTGCTGATCAGGTGGGATGCCCTCCTTGTCCTGGATTTTAGCTTTGAC--ATTCTCAGT 1647394
Query 34916 CGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGAT 34975
| |||| || |||||| |||| ||| ||||| || ||||| || ||||||||||||||
Sbjct 1647393 GGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGAT 1647334
Query 34976 CTGCAT 34981
||||||
Sbjct 1647333 CTGCAT 1647328
>seq99
Length=2554289
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/208 (70%), Gaps = 6/208 (3%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| || || ||||| | || |||| |||||||| || || || ||
Sbjct 1816907 TCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAG 1816966
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | |||||||| || ||||| || || ||
Sbjct 1816967 ATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCAC--AT 1817024
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | |||| || ||| || || | ||| ||||| || ||||| | |||||||
Sbjct 1817025 TCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCA 1817084
Query 34969 CAAAGATCTGCATATT--CGTAGACTTG 34994
| ||||||||||| || | |||| |||
Sbjct 1817085 CGAAGATCTGCATTTTGACCTAGAGTTG 1817112
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || |||| ||| | || || ||||| ||||| || || |||
Sbjct 1822036 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 1822095
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| |||||||| || || || || || || || |||||||| | ||
Sbjct 1822096 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCGCTGCTGGTCAGGAGGG 1822155
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || ||||| || ||||| || ||| | || | || | | ||| ||
Sbjct 1822156 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACC 1822215
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| | ||| ||||| || || || || |||||||| ||||||||||||
Sbjct 1822216 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 1822263
Score = 82.4 bits (90), Expect = 5e-11
Identities = 164/242 (68%), Gaps = 2/242 (1%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || |||| ||| | || || ||||| ||||| || || |||
Sbjct 1822264 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 1822323
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| |||||||| || || || || || || || |||||||| | ||
Sbjct 1822324 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCGCTGCTGGTCAGGAGGG 1822383
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || ||||| || ||||| || ||| | || | || | | ||| ||
Sbjct 1822384 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACC 1822443
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT--CGTAGACT 34992
|| | ||| ||||| || ||||| | |||||||| ||||||||||| || | |||| |
Sbjct 1822444 TCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATTTTGACCTAGAGT 1822503
Query 34993 TG 34994
||
Sbjct 1822504 TG 1822505
>seq205
Length=8045950
Score = 86.0 bits (94), Expect = 4e-12
Identities = 115/157 (73%), Gaps = 5/157 (3%)
Strand=Plus/Plus
Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886
|| ||||||||||| || ||||| || || | |||||||| |||| | |||||||||
Sbjct 434740 TCCTCCAGCTGTTTGCCCGCAAAAATCAGATGCTGCTGGTCAGGCGGGATGCCCTCCTTG 434799
Query 34887 TCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTA 34944
|| | || |||||| || || | | |||| || |||||| ||| ||| |
Sbjct 434800 TCTTGGGTTTTAGCTTTGAC--ATTCTCAGTGGTGTCACTGGGCTCAAC-CCGAGGGTGA 434856
Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||| || ||||| || ||||||||||||||||||||
Sbjct 434857 TGGCCTTGCCCGTTAGGGTCTTCACAAAGATCTGCAT 434893
>seq89
Length=3644534
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/190 (71%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| |||||||| || ||||| || || | || | ||||||||||||| || || ||
Sbjct 1710815 TCCTTCTGAATATTCTAGTCTGACGGGGTGCGGCCCTCATCCAGCTGTTCGCCCGCGAAA 1710756
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
| || || |||||||| | || | ||||||||||| | || || | |||| ||
Sbjct 1710755 CTCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTTGATTTTAGCTCTGAC--AT 1710698
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| | | |||| || |||||| |||| ||| | ||| || ||| | || ||||||
Sbjct 1710697 TCTCAGTGGTGTCACAGGGCTCAACCTCGAGGGTGAGGGTCTTGCCCATCAGGCTCTTCA 1710638
Query 34969 CAAAGATCTG 34978
|||||| |||
Sbjct 1710637 CAAAGACCTG 1710628
>seq164
Length=6526486
Score = 82.4 bits (90), Expect = 5e-11
Identities = 136/193 (70%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||||| | || || || || | || |||| ||||||||||| || | ||
Sbjct 3962309 TCTTTCTGAACATCGTAATCTGACAGAGTACGGCCATCCTCCAGCTGTTTCCCCGTGAAA 3962368
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | ||||||||||| || | |||||| ||
Sbjct 3962369 ATGAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTAGATTGTAGCTTTGAC--AT 3962426
Query 34911 GCT-ATCGAT-TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | | ||| || |||||| |||| ||| || || || || || || |||||||
Sbjct 3962427 TCTTATTGGTGTCAGTGGACTCAACCTCGAGGGTGATAGTCTTGCCTGTCAGGGTCTTCA 3962486
Query 34969 CAAAGATCTGCAT 34981
|||||||||| ||
Sbjct 3962487 CAAAGATCTGTAT 3962499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324504725837544
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