Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21] 32,573 sequences; 2,004,063,690 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq317 107 2e-18 >seq317 Length=3209840 Score = 107 bits (118), Expect = 2e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 || ||||| || || | |||||| ||||| || | || ||||| | |||| || || Sbjct 2108760 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCCGGCATCAGTCCTCGCTTCTTG 2108701 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| ||||||| ||||||||| ||||||||||| || ||||| ||||| ||||| ||| Sbjct 2108700 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGGCT 2108641 Query 37320 ACAAGACGT 37328 |||| |||| Sbjct 2108640 ACAACACGT 2108632 Score = 82.4 bits (90), Expect = 9e-11 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| |||||||| | ||||| || || |||| |||| || || || || ||||| |||| Sbjct 2110108 CATCACTCCCATCCTCTGATACTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTCCCTT 2110050 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | ||||| ||||| |||||||| ||||||||||| Sbjct 2110049 CCAGTGAAATATTCTCCATAAAGTCAAATGGATT 2110016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592075630810920