Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq469 152 3e-32
seq99 123 2e-23
seq119 120 2e-22
seq615 104 2e-17
seq89 91.5 1e-13
seq164 86.0 4e-12
seq1095 82.4 5e-11
>seq469
Length=2995260
Score = 152 bits (168), Expect = 3e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||||||| | |||| ||||||||| ||||| ||||| || ||| ||||| ||||
Sbjct 1051572 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 1051631
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| || || ||||| ||||||| | ||||||||| | || | |||||||||||
Sbjct 1051632 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 1051691
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | ||| ||| ||| || || | ||| |||||
Sbjct 1051692 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1051751
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| ||||| | |||||| || ||||||||||||
Sbjct 1051752 CTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1051785
Score = 152 bits (168), Expect = 3e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||||||| | |||| ||||||||| ||||| ||||| || ||| ||||| ||||
Sbjct 1051800 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 1051859
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| || || ||||| ||||||| | ||||||||| | || | |||||||||||
Sbjct 1051860 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 1051919
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | ||| ||| ||| || || | ||| |||||
Sbjct 1051920 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1051979
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| ||||| | |||||| || ||||||||||||
Sbjct 1051980 CTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052013
Score = 152 bits (168), Expect = 3e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||||||| | |||| ||||||||| ||||| ||||| || ||| ||||| ||||
Sbjct 1052028 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 1052087
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| || || ||||| ||||||| | ||||||||| | || | |||||||||||
Sbjct 1052088 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 1052147
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | ||| ||| ||| || || | ||| |||||
Sbjct 1052148 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1052207
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| ||||| | |||||| || ||||||||||||
Sbjct 1052208 CTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052241
Score = 152 bits (168), Expect = 3e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||||||| | |||| ||||||||| ||||| ||||| || ||| ||||| ||||
Sbjct 1052389 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 1052448
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| || || ||||| ||||||| | ||||||||| | || | |||||||||||
Sbjct 1052449 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 1052508
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | ||| ||| ||| || || | ||| |||||
Sbjct 1052509 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1052568
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| ||||| | |||||| || ||||||||||||
Sbjct 1052569 CTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052602
Score = 152 bits (168), Expect = 3e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||||||| | |||| ||||||||| ||||| ||||| || ||| ||||| ||||
Sbjct 1052617 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 1052676
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| || || ||||| ||||||| | ||||||||| | || | |||||||||||
Sbjct 1052677 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 1052736
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | ||| ||| ||| || || | ||| |||||
Sbjct 1052737 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1052796
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| ||||| | |||||| || ||||||||||||
Sbjct 1052797 CTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052830
Score = 150 bits (166), Expect = 1e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|||||||| || | |||||||| ||| | ||| |||||||| ||||| ||||| ||
Sbjct 1051330 CCTCCCCTTAAACGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 1051389
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| ||||| |||| ||||| || || ||||| ||||||| | ||||||||| | ||
Sbjct 1051390 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 1051449
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || || |||||| | || | ||| ||| ||| ||
Sbjct 1051450 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 1051509
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| ||||| | |||||| || ||||||||||||
Sbjct 1051510 TCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1051557
>seq99
Length=2554289
Score = 123 bits (136), Expect = 2e-23
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||||||||||| | ||| ||||||||| ||||| || || ||
Sbjct 1816871 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 1816930
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || |||||||| || | |||||||| | ||
Sbjct 1816931 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGG 1816990
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| |||||||| || | || || || || || || || | ||| ||| ||| |
Sbjct 1816991 ATGCCCTCCTTATCCTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCCA 1817048
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | ||| |||||||| ||||| | |||||| || |||||||||||
Sbjct 1817049 CCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1817097
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||||||||| | ||| ||||||||| ||||| || || ||
Sbjct 1822036 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 1822095
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || |||||||| || || |||||||| | ||
Sbjct 1822096 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCGCTGCTGGTCAGGAGGG 1822155
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || ||||| || | || || || ||| | || | || | | ||| ||
Sbjct 1822156 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACC 1822215
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| || || |||||||| || |||||||||||
Sbjct 1822216 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1822262
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||||||||| | ||| ||||||||| ||||| || || ||
Sbjct 1822264 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 1822323
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || |||||||| || || |||||||| | ||
Sbjct 1822324 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCGCTGCTGGTCAGGAGGG 1822383
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || ||||| || | || || || ||| | || | || | | ||| ||
Sbjct 1822384 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACC 1822443
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| ||||| | |||||| || |||||||||||
Sbjct 1822444 TCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1822490
>seq119
Length=227305
Score = 120 bits (132), Expect = 2e-22
Identities = 156/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||| |||||||| || ||||| ||| | |||| ||||
Sbjct 86648 AGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGATGGAGTGCGACCATCC 86707
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || | || || ||||| | |||||||| | || | |||||||||||
Sbjct 86708 TCCAGCTGTTTGCTCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 86767
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| |||||| || || | | ||| ||| ||| || |||| ||| ||||
Sbjct 86768 TGGATTTTAGCTTTGAC--ATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGG 86825
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| ||| | |||||||| ||||||| ||||||
Sbjct 86826 TCTTGCCCATCAGGGTCTTCACAAAGACCTGCAT 86859
>seq615
Length=2269971
Score = 104 bits (114), Expect = 2e-17
Identities = 150/209 (72%), Gaps = 7/209 (3%)
Strand=Plus/Minus
Query 34774 GTGAATGGTGCTCTCCTTCTGAA---TGTTATAGTCCGATAGGCTGCGCTCATCGTCCAG 34830
||| | |||| ||||||||||| | || ||||| || || ||| |||| || ||
Sbjct 1647534 GTGCAGGGTGGACTCCTTCTGAAGAATATTGTAGTCTGACAGAGTGCAGCCATCCTCTAG 1647475
Query 34831 TTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTAT 34890
|| || || | || ||||| || ||||| || | || | ||||||||||| | ||
Sbjct 1647474 CTGTTTGCCCACAAAAATCAGACGCTGCTGATCAGGTGGGATGCCCTCCTTGTCCTGGAT 1647415
Query 34891 TTTTTGTTTGACGGATGCTA--TCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
||| |||||| || || | | ||| ||| ||| || || | ||| ||||||||
Sbjct 1647414 TTTAGCTTTGAC--ATTCTCAGTGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTG 1647357
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| |||||||| ||||||||||||||
Sbjct 1647356 CCCGTCAGGGTCTTCACAAAGATCTGCAT 1647328
>seq89
Length=3644534
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/191 (71%), Gaps = 4/191 (2%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||||||||| || ||||| || || |||| | || ||||| || | || |||||
Sbjct 1710816 CTCCTTCTGAATATTCTAGTCTGACGGGGTGCGGCCCTCATCCAGCTGTTCGCCCGCGAA 1710757
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| || |||||||| | || | ||||||||||| || ||||| | |||| |
Sbjct 1710756 ACTCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTTGATTTTAGCTCTGAC--A 1710699
Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| || | | ||| || ||| || || | ||| | |||||| ||| | ||| ||||
Sbjct 1710698 TTCTCAGTGGTGTCACAGGGCTCAACCTCGAGGGTGAGGGTCTTGCCCATCAGGCTCTTC 1710639
Query 34964 ACAAAGATCTG 34974
||||||| |||
Sbjct 1710638 ACAAAGACCTG 1710628
>seq164
Length=6526486
Score = 86.0 bits (94), Expect = 4e-12
Identities = 141/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 34780 GGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCC 34839
|||| ||| ||||||| | || || || || | || |||| ||||| || || ||
Sbjct 3962302 GGTGGACTCTTTCTGAACATCGTAATCTGACAGAGTACGGCCATCCTCCAGCTGTTTCCC 3962361
Query 34840 GGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTT 34899
| ||| || || | |||||||| | || | ||||||||||| | ||| | |||
Sbjct 3962362 CGTGAAAATGAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTAGATTGTAGCTTT 3962421
Query 34900 GACGGATGCT-ATCGAT-TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957
||| || || || | | ||| ||| ||| || || | ||| || ||||| || || |||
Sbjct 3962422 GAC--ATTCTTATTGGTGTCAGTGGACTCAACCTCGAGGGTGATAGTCTTGCCTGTCAGG 3962479
Query 34958 GTCTTTACAAAGATCTGCAT 34977
||||| ||||||||||| ||
Sbjct 3962480 GTCTTCACAAAGATCTGTAT 3962499
>seq1095
Length=2017159
Score = 82.4 bits (90), Expect = 5e-11
Identities = 83/106 (78%), Gaps = 4/106 (4%)
Strand=Plus/Minus
Query 34874 CCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACAT 34931
||||||||||| | ||||| |||||| || || || | ||| ||| ||| || |
Sbjct 1773964 CCCTCCTTGTCTTGGATTTTAGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCAACCT 1773907
Query 34932 CAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| ||| |||||||| ||||| |||||||| ||||||||||||||
Sbjct 1773906 CAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1773861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325563505352687
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