Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq17 107 3e-18
>seq17
Length=4188677
Score = 107 bits (118), Expect = 3e-18
Identities = 118/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444
|||||||||| |||||||| || || || || || || |||||||||||||| || |||
Sbjct 339068 TGGTGGTACTTCATATCTAAGGGAATTGAGTATTTGGACACAGTGTTTTTCATCCTGAGG 339127
Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504
|| || || || || || || |||||||||||||| | ||| |||||||| ||
Sbjct 339128 AAGAAAAACAACCAAGTCTCTTTCCTTCACGTATATCATCACTGTACAATGTTTACATTG 339187
Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAGG 58541
| ||| | || ||||| ||| | ||||| || ||||
Sbjct 339188 TGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACAGG 339224
Score = 84.2 bits (92), Expect = 4e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600
||||||||||| || ||| ||||||| || |||||||| ||||||||| || |||||
Sbjct 340259 GCATTTTTCGGAGCCCAGCTGAATTCCTTCATCCATGTGATTATGTATTCATACTATGGG 340318
Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660
|| | || | ||| | | || | |||||| | |||||||| || ||||| || ||
Sbjct 340319 TTGACTGCCTTTGGCCCGTGGATTCAGAAGTATCTTTGGTGGAAACGATACCTGACCATG 340378
Query 58661 ATGCAATTGGT 58671
|||| ||||
Sbjct 340379 TTGCAGCTGGT 340389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903043364837280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |