Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq251 338 7e-88
seq414 293 3e-74
seq25 181 1e-40
seq756 172 6e-38
seq3359 134 2e-26
seq61 105 8e-18
seq291 86.0 7e-12
>seq251
Length=3596318
Score = 338 bits (374), Expect = 7e-88
Identities = 503/705 (71%), Gaps = 9/705 (1%)
Strand=Plus/Plus
Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931
|| |||||||| ||||| || | || | | | ||||| |||||||| ||||| |
Sbjct 284270 ATTTTGAGCTTCGGGAAAGGCCTTGGTTCTCGCGGAAGCTGCATTTTCAGTGGCTCAGTG 284329
Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991
|| || ||||| | ||| || || |||| ||||| |||| ||| || ||||| |||||
Sbjct 284330 TGATTCAGGTAAATGTGTGCATCTCCCAAAGTGTGTACAAGGTCACCTGGCTTCAGGCCT 284389
Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051
|| | ||| || | ||||||||||||||| ||||||||||| ||||||||||| || |||
Sbjct 284390 GTGATGTGTGCAATCATGTAGGTGAGCAGAGAGTAGCTGGCGATGTTGAAGGGCACGCCC 284449
Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAA 147111
||||||||||| || |||| || ||||||||||| || ||||| |||| |||||||
Sbjct 284450 AGGCCCATGTCTCCTGACCGCTCATACAGCTGGCAGGACAGCTCACCGTTCACCACGTAG 284509
Query 147112 AACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG-GCGGGCAGGTCCGCGGGGTTCCA 147170
|||||||| ||| ||||| ||||| || ||| || ||||| |||| || |||||
Sbjct 284510 AACTGGCAAAGGGCATGGCAGGGCGGGAGGGCCGTGAGCGGG-AGGTGTTTTGGATTCCA 284568
Query 147171 GGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCT 147230
||| | | | | | ||| | ||||| | || || || | ||| |
Sbjct 284569 GGCACACATGATGATTCTTCTGTCATTAGGGTTGGTTTTGATTGTGTCAGTCACCTTCTG 284628
Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTG-TCCCGCAGTCCACGTACCTGGCCCCAA 147289
||| ||||| || || | ||| || | || ||| | || |||| ||||||||
Sbjct 284629 CAGTTGGTCTACTCCTTTGCCTGAATAATCTGAATCCGTA-TCTTCGTATTCGGCCCCAA 284687
Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349
| ||||||||||| |||| ||| ||||| || || || || | |||| ||||| |
Sbjct 284688 AATGCCTCCACTGAAAGCGGTATACTGGGCCTAGATCTCC---TTCTCTGGTGGAGAATC 284744
Query 147350 CC-GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCG 147408
|| | | | ||| | | ||||||| | |||||||||||| |||||||||||
Sbjct 284745 CCAGGCTGTCCAAGACGC-CTCGGGACCCATTGGCGTCCCAGATTTTCACTCCCTTGGAA 284803
Query 147409 GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCC 147468
|| |||||||||| || ||||| ||| ||| ||||| |||| ||||||||||| |||
Sbjct 284804 GACAGCTCCTTAGCGTTTGTGGATCCCTTGATAAACCACAGCAATTCCTCCAAAACACCC 284863
Query 147469 CTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGTCCCTCAGCGAATACCTCGCC 147528
|||| || || | ||||| || ||||| || || | || || || || | ||||
Sbjct 284864 TTCCAGAAAACACGTTTGGTTGTGAGCAGTGGAAATTCATCTCTGAGGCTGTAGCGCGCC 284923
Query 147529 TGGTCCCCAAACACAGACAGCGTGCCCGTGCCCGTCCTGTCCTCC 147573
|| || ||||| ||||| ||||| |||||||| | ||| |||
Sbjct 284924 TGCATGCCGAACACCGACAGGGTGCCGGTGCCCGTGCAGTCGTCC 284968
>seq414
Length=6018750
Score = 293 bits (324), Expect = 3e-74
Identities = 257/320 (80%), Gaps = 0/320 (0%)
Strand=Plus/Minus
Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131
|||||||||||||||| || | || ||||||||| || ||||| | | ||||| |||
Sbjct 4933547 GTGGTGACCCAGGATGTAAGAGAGCCGCTGAACACACCTGCCTCTTTAAGCTGCTCTCTG 4933488
Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191
|| | | | || || || ||||||| || ||||| ||||||||| | | || ||
Sbjct 4933487 CAAAATCCCCAAGAAGTCTTGATTGTGACATGGCAAAAAATCAAGGCTGTAAGCCCGGAA 4933428
Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251
|||||||| || || ||| | |||| ||||| || |||||||| || ||||||||||||
Sbjct 4933427 AACATGATCACCTTCAGCGAGAACCATGGGGTTGTAGTCCAGCCTGCCTATAAGGACAAG 4933368
Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311
|||||||||||||| || |||||| ||||||||||| || || ||||||||||||||
Sbjct 4933367 ATAAACATCACCCAACTGGGACTCATGAACTCAACCATTACCTTCTGGAATACCACCTTG 4933308
Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371
||||| |||||||| ||||| |||||||| || |||||||| |||||||| ||||| ||
Sbjct 4933307 GAGGATGAGGGGTGTTACAAGTGCCTCTTCAATACCTTTGGTTCTGGGAAGATCTCAGGA 4933248
Query 171372 GTGGCCTGCCTCACCCTCTC 171391
|| |||||||||||||||||
Sbjct 4933247 GTAGCCTGCCTCACCCTCTC 4933228
Score = 208 bits (230), Expect = 9e-49
Identities = 215/282 (76%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 171388 TCTCNGTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCA 171447
|| | || ||||||| || || || || || ||||| | ||| |||||||| || ||||
Sbjct 4930898 TCCCAGTACAGCCCAAAGTTTTCCTTCACTACAAATTCTCTGAAGACCACCTAAATATCA 4930839
Query 171448 CCTGTTCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAA 171507
| || ||||||||||| ||||| | ||| ||| | |||||| | || ||||| | |
Sbjct 4930838 CTTGCTCTGCCAATGCTCGCCCAGCCCCTGTGATCTCCTGGAAGGTCTCTGGGTCGGGGA 4930779
Query 171508 TTGAAAACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTAC 171567
|||| ||||||| ||| |||| || || | ||||| || || ||||| ||||| | |
Sbjct 4930778 TTGAGAACAGTACTGAGATTCTCTCACACCCCAATGGGACAACATCTGTCACCAGCATCC 4930719
Query 171568 TCCAAGTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACC 171627
|||| || |||||||||||||||||| |||| |||||||| |||||||| ||| | |||
Sbjct 4930718 TCCAGGTCAAAGACCCCAAGAGTCAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGTACC 4930659
Query 171628 TGGGAAATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669
|||| | ||| || |||| |||||||| || | ||| ||||
Sbjct 4930658 TGGGGACTGTGACCAACTACAGGGAAACGGTGAACAAAGGTA 4930617
>seq25
Length=14465811
Score = 181 bits (200), Expect = 1e-40
Identities = 144/172 (84%), Gaps = 1/172 (1%)
Strand=Plus/Plus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| ||||| || | ||| || | |||| |||||||||| ||||||||||| ||||||||
Sbjct 2982280 CTTCAGGCCTGTGATGTGTGCGATCATGCAGGTGAGCAGGGAGTAGCTGGCGATGTTGAA 2982339
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
||| || |||||||||||||| ||||||| ||||||||||||||| || ||||| ||||
Sbjct 2982340 GGGCACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTT 2982399
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG-GCGGG 147152
||||||| |||||||| ||| |||||| ||||| || |||||| |||||
Sbjct 2982400 CACCACGTAGAACTGGCAAAGGGCGTGGCAGGGCGGGAGGGCCATGAGCGGG 2982451
Score = 93.3 bits (102), Expect = 5e-14
Identities = 117/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341
||||||||| |||||||| || |||||||| || || || || || || | ||||
Sbjct 2985542 GGCCCCAAAATGCCTCCATTGAAAGCCGTAAACCGGGCCTAGATCTCCTTCTTCTCTGGT 2985601
Query 147342 CGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401
||||| ||| | | | || || ||||||| | |||||||||||| ||||||
Sbjct 2985602 GGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTGGCGTCCCAGATTTTCACTCC 2985661
Query 147402 CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442
||||| || |||||||||| || ||||| ||| ||| ||
Sbjct 2985662 CTTGGAAGACAGCTCCTTAGCGTTTGTGGATCCCTGGAGGA 2985702
>seq756
Length=2993967
Score = 172 bits (190), Expect = 6e-38
Identities = 137/167 (82%), Gaps = 12/167 (7%)
Strand=Plus/Plus
Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290
|||||||| |||||||||| |||||||| |||||||| ||||||||| ||||||||||||
Sbjct 528811 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGA 528870
Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350
|||| ||||| ||||| ||| ||||| ||||| ||||||||||| ||||
Sbjct 528871 TGCCGCAGGCGGAGAACCAC------------GGCCCTGACATCAAGGAGCATGTGAACT 528918
Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397
| |||||||| ||||| |||||||| ||| |||||||||| || |||
Sbjct 528919 CCCTGGGGGAGAAGCTGAAGACCCTCAGACTGAGGCTGCGTCGCTGT 528965
Score = 98.7 bits (108), Expect = 1e-15
Identities = 74/87 (85%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521
|||| ||||| ||||| || |||||||| ||||||||||| || || ||||| |||||||
Sbjct 531157 AGCTCCAAGAGAAGGGGGTCTACAAAGCCATGAGTGAGTTCGACATCTTTATCAACTACA 531216
Query 178522 TAGAAGCTTACATGACAACaaaaatga 178548
||||||| |||||||||| || ||||
Sbjct 531217 TAGAAGCCTACATGACAATGAAGATGA 531243
Score = 84.2 bits (92), Expect = 3e-11
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 178173 CAAATGAAGGACCAGCTGGACAACATGTTGTTAAATGGGTCCCTGCTGGAAGACTTTAAG 178232
||||||||||||||||||||||||||| |||| | ||||||||||||| |||||||||
Sbjct 528511 CAAATGAAGGACCAGCTGGACAACATGCTGTTGACCAGGTCCCTGCTGGAGGACTTTAAG 528570
Query 178233 G 178233
|
Sbjct 528571 G 528571
>seq3359
Length=23808
Score = 134 bits (148), Expect = 2e-26
Identities = 214/299 (72%), Gaps = 16/299 (5%)
Strand=Plus/Plus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
|||||| ||||| ||| | |||| || |||||||| ||| ||| ||||||| |||||
Sbjct 14214 GTACTCCCTGGTATTTGTCATTGGCCTGATTGGCAACATCCTAGTGGTCCTAGTTCTCAT 14273
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
| |||||||||||||| | |||||||| ||||| ||| ||||||||||| || |||
Sbjct 14274 GCAATACAAGAGGCTCAGAAGCATGACCAGCATCTACCTCCTCAACCTGGCCATTTCTGA 14333
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCA-CTCGGGGGGAACTGG-T 8787
|||| | | | ||||| || ||||| |||||| ||| | | || || ||||| |
Sbjct 14334 CCTGATCTTCCTCTTCACACTGCCCTTCTGGATTGACTACAAGCTGAAGGATGACTGGAT 14393
Query 8788 GGGTGGGACGCCGACCACCACATGTGTAAGTTTAT-AGTGGGC-CT-TTGCAACGTGGCA 8844
|||| | |||||||||||||| | ||||| || || || ||||
Sbjct 14394 TTTTGGG--------GATCACATGTGTAAGTTGCTCTCTGGGCTCTATTTCA--TTGGC- 14442
Query 8845 CTGTACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGT 8903
||||||| || || | || ||||||||| | || | |||||||| || || |||||
Sbjct 14443 TTGTACAGTGAGATCTTCTTCATCATCCTGCTCACCATTGACAGGTACCTGGCTGTTGT 14501
>seq61
Length=1472917
Score = 105 bits (116), Expect = 8e-18
Identities = 118/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
|||||| ||||||| | |||| || | ||||| | ||||| | | |||| |
Sbjct 30740 GTACTCCTTGGTGTTCGGGGTTGGCCTGCTGGGCAACGTGGTGGTGCTGATGATCCTTAC 30799
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
||| |||||||||||| |||||||||||||||| |||| ||||||||||| || |||
Sbjct 30800 AAAATACAAGAGGCTCCACATCATGACCAACATCTACCTGCTCAACCTGGCCGTTTCTGA 30859
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767
|||||| | | |||| || || || ||||||||||
Sbjct 30860 CCTGCTTGTCCTGCTCACGCTGCCGTTCTGGATTCACT 30897
>seq291
Length=4377177
Score = 86.0 bits (94), Expect = 7e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670
||||| |||| ||| ||||||| || |||| ||| | ||||| | || || || |
Sbjct 3551286 TACTCCTTGGTCTTTCTGTTTGGCCTGCTTGGAAATTCTGTGGTGGTTCTGGTTCTGTTC 3551227
Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730
||||||||| |||||| | ||||||| || | | |||| ||||||||||| | |||
Sbjct 3551226 AAGTACAAGCGGCTCAAGTCCATGACCGACGTGTACCTGCTCAACCTGGCCATCTCGGAC 3551167
Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760
||||| | | || | |||||||| |||
Sbjct 3551166 CTGCTCTTCGTGCTCTCGCTCCCCTTCTGG 3551137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583250425567200
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