Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq469 131 2e-25
seq99 123 2e-23
>seq469
Length=2995260
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 1051593 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAA 1051652
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 1051653 GATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 1051712
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 1051713 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCAC 1051772
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1051773 GAAGATCTGCAT 1051784
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 1051821 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAA 1051880
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 1051881 GATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 1051940
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 1051941 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCAC 1052000
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1052001 GAAGATCTGCAT 1052012
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 1052049 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAA 1052108
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 1052109 GATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 1052168
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 1052169 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCAC 1052228
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1052229 GAAGATCTGCAT 1052240
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 1052410 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAA 1052469
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 1052470 GATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 1052529
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 1052530 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCAC 1052589
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1052590 GAAGATCTGCAT 1052601
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 1052638 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAA 1052697
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 1052698 GATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 1052757
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 1052758 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCAC 1052817
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1052818 GAAGATCTGCAT 1052829
Score = 129 bits (142), Expect = 5e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||| ||| | || |||||||| || || |||||
Sbjct 1051366 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAG 1051425
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||||| ||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 1051426 ATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTC 1051485
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | |||||||||| ||||| || ||||||||||| || |||||
Sbjct 1051486 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACG 1051545
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 1051546 AAGATCTGCAT 1051556
>seq99
Length=2554289
Score = 123 bits (136), Expect = 2e-23
Identities = 145/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||| | | || || | || ||||||||||| || || ||
Sbjct 1816906 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAA 1816965
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | ||| | || |||||| ||| |||||| ||||| | |
Sbjct 1816966 GATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 1817025
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || || |||||||| || |||||
Sbjct 1817026 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCAC 1817085
Query 35725 AAATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 1817086 GAAGATCTGCATTTTG 1817101
Score = 123 bits (136), Expect = 2e-23
Identities = 145/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||| | | || || | || ||||||||||| || || ||
Sbjct 1822299 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAA 1822358
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||||||| | ||| | || ||||| ||| |||||| ||||| |
Sbjct 1822359 GATGAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 1822418
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | |||||||||| ||||| || || |||||||| || |||||
Sbjct 1822419 CTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCAC 1822478
Query 35725 AAATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 1822479 GAAGATCTGCATTTTG 1822494
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||| | | || || | || ||||||||||| || || ||
Sbjct 1822071 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAA 1822130
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||||||| | ||| | || ||||| ||| |||||| ||||| |
Sbjct 1822131 GATGAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 1822190
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | |||||||||| ||||| || || || |||| || |||||
Sbjct 1822191 CTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 1822250
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1822251 GAAGATCTGCAT 1822262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450610053750840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |