Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21] 32,573 sequences; 2,004,063,690 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq615 82.4 6e-11 seq48 82.4 6e-11 >seq615 Length=2269971 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 27064 GAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGAC 27123 ||||||||||||| || ||| | || || |||||||| || | |||| |||| Sbjct 1647511 GAATATTGTAGTCTGACAGAGTGCAGCCATCCTCTAGCTGTTTGCCCACAAAAATCAGAC 1647452 Query 27124 GCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAG 27183 |||| ||||| || || | ||||| || || ||| || ||| | | || | Sbjct 1647451 GCTGCTGATCAGGTGGGATGCCCTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAGTGG 1647392 Query 27184 TGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTT 27243 |||| ||| ||||| || || || || | ||||||||||| || ||||||||||| | Sbjct 1647391 TGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCT 1647332 Query 27244 GCATAGCTGC 27253 |||| |||| Sbjct 1647331 GCATCTCTGC 1647322 >seq48 Length=13907917 Score = 82.4 bits (90), Expect = 6e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 131030 GCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTT 131089 |||||||| ||| |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 111344 GCCAGGTCACAGCTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTC 111403 Query 131090 AATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGA 131149 | | | || | ||||| |||| || |||| | ||||||||| ||||| ||| Sbjct 111404 AGTAACTGGGCCTCCGGACTCTCAAAAGGGTATCTCATCAGAATAAAAGCATCTGCCAGA 111463 Query 131150 CCCTGTATCCCAA 131162 || |||| ||||| Sbjct 111464 CCTTGTACCCCAA 111476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424765708081176