Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq251 145 6e-30
>seq251
Length=3596318
Score = 145 bits (160), Expect = 6e-30
Identities = 484/740 (65%), Gaps = 26/740 (4%)
Strand=Plus/Plus
Query 111563 AAATAGCAACATCCATCTTTATAGCAGGATGAGGTCTATAATTCTCCAAT-TCAAAGTCA 111621
||| ||| | ||||| || |||| |||||||| | || || |||| | ||||||
Sbjct 284172 AAACAGCCATTTCCATTTTAATAGTCGGATGAGGATTGTAGC-CTTCAATCTGAAAGTCT 284230
Query 111622 TCAGCAACAAAATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGG 111681
||||| || | ||| | ||||| |||| ||||| || || || || ||
Sbjct 284231 TCAGCCTTGAAGCCATCAGTTTTCTCAACTTTTCGAAGCATTTTGAGCTTCGGGAAAGGC 284290
Query 111682 GTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCA 111741
| || | ||| | |||||| | || | |||| ||||||| | |||| || |||
Sbjct 284291 CTTGGTTCTCGCGGAAGCTGCATTTTCAGTGGCTCAGTGTGATTCAGGTAAATGTGTGCA 284350
Query 111742 TCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTAT 111801
||||| | | || | | || | |||| || || ||||||||||||||||||||
Sbjct 284351 TCTCCCAAAGTGTGTACAAGGTCACCTGGCTTCAGGCCTGTGATGTGTGCAATCATGTAG 284410
Query 111802 GTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTT 111861
||||| ||| ||| || || ||||| || ||||| || |||||||| ||||| || |
Sbjct 284411 GTGAGCAGAGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCTCCTGACCGC 284470
Query 111862 TGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACAAAGTACATGACAA 111921
| ||| ||||| || || || | | | ||| || || || ||||| |||| ||
Sbjct 284471 TCATACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAAGGGCATGGCAG 284530
Query 111922 GGAGGCAATGCCAT----CCCATTCATAAAGGGTCCCCATGCACACATGATCATCCTTCT 111977
|| || | ||| | | | || | ||| ||||||||||| || |||||
Sbjct 284531 GGCGGGAGGGCCGTGAGCGGGAGGTGTTTTGGAT-TCCAGGCACACATGATGATTCTTCT 284589
Query 111978 G-CTGTAGCGATTATGTTCAATGTCGTGTATGACATTCAAGAGCTGGTCTATCCCTTTAC 112036
| | ||| | | | || | ||| || | || ||| || ||||||| ||||| |
Sbjct 284590 GTCATTAGGGTTGGTTTTGATTGT-GTCAGTCACCTTCTGCAGTTGGTCTACTCCTTTGC 284648
Query 112037 CAGTATAATCCGCCTGACATCCAGT------GTATGTTGCCCCATAGTGTCTCCATTGGA 112090
| | ||||| |||| |||| || |||| |||||| | || ||||| || |
Sbjct 284649 CTGAATAAT----CTGA-ATCC-GTATCTTCGTATTCGGCCCCAAAATGCCTCCACTGAA 284702
Query 112091 ATCCATAAATAGGCCCCAGATCTCCCGGGGCTGTATCTGGA-AATTGCTCTCTATTCAAC 112149
| | || | || || |||||||| || | |||| ||| | || | |||
Sbjct 284703 AGCGGTATACTGGGCCTAGATCTCC---TTCTCT-GGTGGAGAATCCCAGGCTGTCCAAG 284758
Query 112150 AAATCACTTCTAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCA 112209
| | | || | | ||| || |||||||| || || || | ||| | ||
Sbjct 284759 ACGCCTCGGGACCCATTGGCGTCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCG 284818
Query 112210 TTTGTGGATCCTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTT 112269
||||||||||| | |||||||| |||||||| |||| ||| || |||||| | || | |
Sbjct 284819 TTTGTGGATCCCTTGATAAACCACAGCAATTCCTCCAAAACACCCTTCCAGAAAACACGT 284878
Query 112270 TTAGTAGTTAGCAGTGGaaa 112289
|| || || |||||||||||
Sbjct 284879 TTGGTTGTGAGCAGTGGAAA 284898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391790004088399
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |