Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq170 129 8e-25
>seq170
Length=4243350
Score = 129 bits (142), Expect = 8e-25
Identities = 584/919 (64%), Gaps = 19/919 (2%)
Strand=Plus/Plus
Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742
||||||| |||||||| || || || || || ||| | || ||||| ||||| ||| ||
Sbjct 890019 GAAGAGGCAGAGTTTCCAATAGCATATTCTATAGTGGTTCATCACAAAATCGAAATGCTC 890078
Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802
|| | ||||||||||||||||| || ||||| |||||||| | |||||||||
Sbjct 890079 GACAGGCTCCTGAGGGCCATCTATATGCCTCAGAATTTCTACTGCATTCACGTGGACAAA 890138
Query 13803 AAGTCCGGCGACGAGTTCATCCGGG--GC-GTCTCGGCCATCGCCAGGTGCTTCCCTAAC 13859
|| || ||| || | | | || || || | ||| || || ||| ||||
Sbjct 890139 AAATC---CGAGGAATCCTTTTTGGCTGCAGTGATTGGCATTGCGTCTTGTTTCAGTAAC 890195
Query 13860 GTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCC 13919
|| ||||| | ||| | |||||||| | ||| ||||| || || |||||
Sbjct 890196 GTTTTTGTGGCCAGGCAACTGGAGAGTGTGGTGTATGCCTCGTGGAGCCGGGTTCAGGCT 890255
Query 13920 GACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAAC 13979
||| ||| ||||||| |||||| || | | |||| |||| || ||||
Sbjct 890256 GACATCAACTGCATGCAGGACCTCTACAAAATGAGTGCGGACTGGAAGTACTTGATCAAT 890315
Query 13980 CTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCC 14039
|| ||||| ||||| || ||| | || ||||||||||| || || || ||| ||| |
Sbjct 890316 CTCTGCGGTATGGATTTTCCGATTAAAACCAACCTGGAAATTGTCAGGAAGCTCAAGTCG 890375
Query 14040 CTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAGCTGCACCGCATC 14099
| ||| ||||| ||| || | |||| |||||| ||| || | |
Sbjct 890376 TTAATGGGCGAGAACAACCTAGAAACCGAGAAAATGCCCGCCCATAA---AAAAGAAAGG 890432
Query 14100 AGGAAGAGGCACGTGGTGGCCAGCGG----CGGCGTGGTGGTCAACACCGGCAGGAACAA 14155
|||| | |||| | ||| || || | || |||| || | ||||
Sbjct 890433 TGGAAAAAGCAC----TATACAGTGGTTAATGGAAAGCTGACAAACATGGGGACTGACAA 890488
Query 14156 GGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCACCCG 14215
| || || || | || | ||| | || | ||| || |||| ||||| |
Sbjct 890489 AATACATCCTCCTCTTGAAACGCCGCTGTTTTCAGGCAGCGCCTATTTTGTGGTCAGTAG 890548
Query 14216 GGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCACTGGTTCGA 14275
| ||| |||| || || || || | || | | | ||| | ||| |
Sbjct 890549 GAAGTATGTGGGCTATGTGCTTGAGAATGAAAAAATCCAGAAGTTTATGGAGTGGGCAAA 890608
Query 14276 GGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCC 14335
|| || |||||||| |||||| | || |||||||| | ||||| ||| | | | ||
Sbjct 890609 AGATACATACAGCCCAGACGAGTATCTCTGGGCCACTATTCAGAGGATG-CCTGAAGTCC 890667
Query 14336 CGGGGGGATCCCCGTTCACGTC-AAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGT 14394
| || | | || | || |||||||||| || |||||| | | | |||||
Sbjct 890668 CAGGCTCACTGTCCTTAAGTTCTAAGTACGACATGTCAGACATGCACTCTATTGCCAGGT 890727
Query 14395 TCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCG 14454
| || |||||||| |||| || || || | || || |||| |||||||| |||
Sbjct 890728 TTGTTAAGTGGCAGTACTTTGAAGGTGACGTTTCCAAGGGCGCCCCCTACCCGCCGTGCA 890787
Query 14455 ACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAAGA 14514
|||||||||||| | | | | || | ||||| |||| ||| |||| ||| || |
Sbjct 890788 GCGGCATCCACGTGCGCTCTGTATGTGTTTTCGGAGCCGGTGACTTGAACTGGATGCTGC 890847
Query 14515 GCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGAGTTCGCCGTGCGCT 14574
||| | |||||||| ||||| ||||| ||| || | ||| || ||| | | |
Sbjct 890848 ACGTGCACCACCTGTTTGCCAATAAGTTTGACACAGACATAGACTTCTTTGCCATCCAGT 890907
Query 14575 GTCTGGACGAGGACGTGCG 14593
|| |||||||| | ||||
Sbjct 890908 GTTTGGACGAGCATCTGCG 890926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658470986100480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |