Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21] 32,573 sequences; 2,004,063,690 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq119 84.2 1e-11 >seq119 Length=227305 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||| | || || || ||||| | ||| || || ||||| || || ||||| ||| Sbjct 86859 ATGCAGGTCTTTGTGAAGACCCTGATGGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 86800 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| ||| ||| | ||| | |||| | ||||| || || | || || || || Sbjct 86799 GACACCACTGAGAATGTCAAAGCTAAAA-TCCAAGACAAGGAGGGCATCCCACCTGACCA 86741 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| ||||||| ||||| || | |||||| | || ||||| Sbjct 86740 GCAGCATCTGATTTTTGCGAGCAAACAGCTGGAGGATGGTCGCACTCCATCAGACTACAA 86681 Query 23790 CATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 86680 TATTCAGAAAGAGTCCAC 86663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337875415787084