Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq469 161 7e-35
seq99 145 5e-30
>seq469
Length=2995260
Score = 161 bits (178), Expect = 7e-35
Identities = 177/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | || |||||||| || ||| |||||| ||||||||||| ||
Sbjct 1051554 CATGCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 1051613
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 1051614 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 1051673
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| || | | |||| | |||||||| || |
Sbjct 1051674 GGGGATGCCCTCCTTGTCTTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCT 1051732
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| ||||| | ||||||||||||||| ||||||
Sbjct 1051733 CCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1051785
Score = 161 bits (178), Expect = 7e-35
Identities = 177/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | || |||||||| || ||| |||||| ||||||||||| ||
Sbjct 1051782 CATGCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 1051841
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 1051842 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 1051901
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| || | | |||| | |||||||| || |
Sbjct 1051902 GGGGATGCCCTCCTTGTCTTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCT 1051960
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| ||||| | ||||||||||||||| ||||||
Sbjct 1051961 CCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052013
Score = 161 bits (178), Expect = 7e-35
Identities = 177/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | || |||||||| || ||| |||||| ||||||||||| ||
Sbjct 1052010 CATGCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 1052069
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 1052070 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 1052129
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| || | | |||| | |||||||| || |
Sbjct 1052130 GGGGATGCCCTCCTTGTCTTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCT 1052188
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| ||||| | ||||||||||||||| ||||||
Sbjct 1052189 CCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052241
Score = 161 bits (178), Expect = 7e-35
Identities = 177/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | || |||||||| || ||| |||||| ||||||||||| ||
Sbjct 1052371 CATGCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 1052430
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 1052431 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 1052490
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| || | | |||| | |||||||| || |
Sbjct 1052491 GGGGATGCCCTCCTTGTCTTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCT 1052549
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| ||||| | ||||||||||||||| ||||||
Sbjct 1052550 CCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052602
Score = 161 bits (178), Expect = 7e-35
Identities = 177/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | || |||||||| || ||| |||||| ||||||||||| ||
Sbjct 1052599 CATGCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 1052658
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 1052659 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 1052718
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| || | | |||| | |||||||| || |
Sbjct 1052719 GGGGATGCCCTCCTTGTCTTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCT 1052777
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| ||||| | ||||||||||||||| ||||||
Sbjct 1052778 CCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 1052830
Score = 140 bits (154), Expect = 2e-28
Identities = 159/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||| ||||| ||||||||||| || | || |||| | || |||
Sbjct 1051348 ACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1051407
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| ||||||||||||||||| | |||||| |||| || | || ||||| ||
Sbjct 1051408 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 1051467
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| || | | |||| | |||||||| || |||||||||| || || |||||
Sbjct 1051468 ATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 1051526
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | ||||||||||||||| ||||||
Sbjct 1051527 ACCCGTCAAGGTCTTCACGAAGATCTGCATG 1051557
>seq99
Length=2554289
Score = 145 bits (160), Expect = 5e-30
Identities = 173/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || |||||||| || || |||||| ||||||||||||||
Sbjct 1822032 CATACCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATC 1822091
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || ||||||||||| || || ||||| | |||||||| || |
Sbjct 1822092 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCGCTGCTGGTCAGG 1822151
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| ||||| |||| | |||| | ||||||||| | |
Sbjct 1822152 AGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC-ACGTTCTCGATGGTGTCGCTAGGCT 1822210
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct 1822211 CCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1822262
Score = 145 bits (160), Expect = 5e-30
Identities = 173/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || |||||||| || || |||||| ||||||||||||||
Sbjct 1822260 CATACCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATC 1822319
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || ||||||||||| || || ||||| | |||||||| || |
Sbjct 1822320 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCGCTGCTGGTCAGG 1822379
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| ||||| |||| | |||| | ||||||||| | |
Sbjct 1822380 AGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC-ACGTTCTCGATGGTGTCGCTAGGCT 1822438
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| || || ||||| ||||| | ||||||||||||||| |||||
Sbjct 1822439 CCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1822490
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | | |||||||| || || |||||| |||||||||||||| |
Sbjct 1816871 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 1816930
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || || ||||| | | |||||| || | |||
Sbjct 1816931 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGG 1816990
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| ||||| ||||| | | |||||||| || ||||||
Sbjct 1816991 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACC 1817050
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || || ||||| ||||| | ||||||||||||||| |||||
Sbjct 1817051 TCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1817097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359847489773541
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