Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq738 187 2e-42 >seq738 Length=1970462 Score = 187 bits (206), Expect = 2e-42 Identities = 386/573 (67%), Gaps = 6/573 (1%) Strand=Plus/Plus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || || || ||||| | ||| |||| |||||||| |||||||| || ||||| |||| Sbjct 1172732 GGAGATCTAGGCCCAGTATACCGCTTTCAGTGGAGGCATTTTGGGGCCGAATACGAAGAT 1172791 Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908 | ||| | |||| | ||||| | || || ||||| | || | || ||||| Sbjct 1172792 ACGGATTCAGATTATTCAGGCAAAGGAGTAGACCAACTGCAGAAGGTGACTGACACAATC 1172851 Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCC 18968 ||||| ||||| | | || |||| || || | | ||||||||||| | |||| Sbjct 1172852 AAAACCAACCCTAATGACAGAAGAATCATCATGTGTGCCTGGAATCCAAAACACCTCCCG 1172911 Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTA 19028 | | || || || || || || | | || ||||| ||||| | |||||||| | Sbjct 1172912 CTCACGGCCCTCCCACCCTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACGGTGAGCTG 1172971 Query 19029 TCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCT 19088 |||||||| | || || | || || || |||||||| || || || |||||||| || Sbjct 1172972 TCCTGCCAGCTGTATGAGCGGTCAGGAGACATGGGCCTGGGCGTGCCCTTCAACATCGCC 1173031 Query 19089 GGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTA 19148 | || | || || |||||||| | || || | ||||| || || | || || | Sbjct 1173032 AGCTACTCTCTGCTCACCTACATGATTGCACACATCACAGGCCTGAAGCCAGGTGACCTT 1173091 Query 19149 ATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAG 19208 | || || |||| |||||||| |||||| ||||||| | || | | ||| ||||| Sbjct 1173092 GTACACACTTTGGGAGATGCACACATTTACCTGAATCACACTGAGCCACTGAAAATGCAG 1173151 Query 19209 CTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGATATA 19268 || | ||| |||| ||||| || || ||||| ||||||| || || | | Sbjct 1173152 CTTCCGCGAGAACCAAGGCCTTTCCCGAAGCTCAAAATGCTTCGAAAAGT---TGAGAAA 1173208 Query 19269 A---ACGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccccTA 19325 | | | ||| || || || |||||| |||| || || ||||| || || | | Sbjct 1173209 ACTGATGGCTTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAATCCTCATCCGACTATT 1173268 Query 19326 AAAATGGAAATGGCTCTTTAATGGATTTTTAAA 19358 ||||||||||||||| ||||| | ||||||| Sbjct 1173269 AAAATGGAAATGGCTGTTTAAAGTGCTTTTAAA 1173301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399439077354030