Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq738 188 5e-43 >seq738 Length=1970462 Score = 188 bits (208), Expect = 5e-43 Identities = 442/661 (67%), Gaps = 7/661 (1%) Strand=Plus/Minus Query 97009 GGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAA 97068 ||||||||||| || ||||| ||||||| | | || | ||| ||||||||| ||| Sbjct 1173177 GGGAAAGGCCTTGGTTCTCGCGGAAGCTGCATTTTCAGTGGCTCAGTGTGATTCAGGTAA 1173118 Query 97069 ATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCG 97128 ||||| |||||||| |||||||| | || || || || | | |||| || || Sbjct 1173117 ATGTGTGCATCTCCCAAAGTGTGTACAAGGTCACCTGGCTTCAGGCCTGTGATGTGTGCA 1173058 Query 97129 ATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCA 97188 ||||| | || | ||||| ||||| || ||||| || ||||| || || ||||| || Sbjct 1173057 ATCATGTAGGTGAGCAGAGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCT 1172998 Query 97189 GCTGATCTTTGATATAACTGACAGGAAAGCTTTCCAT-CACACACATAAAACTGACTCAA 97247 |||| | | ||| | ||| ||||| |||| || | ||| ||| || ||||| | | Sbjct 1172997 CCTGACCGCTCATACAGCTGGCAGGACAGCTCACCGTTCAC-CACGTAGAACTGGCAAAG 1172939 Query 97248 TACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAA 97307 |||| ||||| || | ||| | || | | | |||||| |||||||| | Sbjct 1172938 GGCATGGCAGGGTGGGAGGGCCGTGAGCGGGAGGTGTTTTGGATTCCAGGCACACATGAT 1172879 Query 97308 CATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAAC 97367 |||||||| || | ||||| || | || || | | | | || || | ||| || || Sbjct 1172878 GATTCTTCTGTCATTAGGGTTGGTTTTGATTGTGTCAGTCACCTTCTGCAGTTGGTCTAC 1172819 Query 97368 GCCTTCTCCACCATAATTGTGCTTAAG-ACCTTGATATTCTGCTCCAAAATGCCTCCATT 97426 |||| || ||||| || | | | ||| ||||| || |||||||||||||| | Sbjct 1172818 TCCTTTGCCTGAATAATC-TGAATCCGTATCTTCGTATTCGGCCCCAAAATGCCTCCACT 1172760 Query 97427 GGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTA 97486 | || | || || || || || ||||||||| || |||| || || | || | Sbjct 1172759 GAAAGCGGTATACTGGGCCTAGATCTCCTTCT---CTGGTGGAGAATCCCAGGCTGTCCA 1172703 Query 97487 AATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGC 97546 | | | || ||||| || ||||| || | ||| || | | ||||| || Sbjct 1172702 AGACGCCTCGGGACCCATTGGCGTCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAG 1172643 Query 97547 TGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTC 97606 || || ||||| |||||||||||| |||||| |||| |||||| |||| || || | Sbjct 1172642 CGTTTGTGGATCCCTTGATAAACCACAGCAATTCCTCCAAAACACCCTTCCAGAAAACAC 1172583 Query 97607 TCTTAGTTGTTAAGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCATTCCAAAAA 97666 || ||||| | || ||||| || | | | |||||| | | |||||| || || | Sbjct 1172582 GTTTGGTTGTGAGCAGTGGAAATTCATCTCTGAGGCTGTAGCGCGCCTGCATGCCGAACA 1172523 Query 97667 C 97667 | Sbjct 1172522 C 1172522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346727644782380