Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq558 125 6e-24 seq1615 86.0 6e-12 >seq558 Length=2742737 Score = 125 bits (138), Expect = 6e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| |||||| || |||||||| ||||| || || || ||||| || || ||||| Sbjct 2651002 ACCTCATCTTTGCTAGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTT 2650943 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 |||| || ||||||||| || ||||| || ||||| ||||||||||||||||| || Sbjct 2650942 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTA 2650883 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196 || |||||| ||| ||||| ||||| || Sbjct 2650882 CCTGTCTCGGTCTGAGACTCAATGATGGC 2650854 >seq1615 Length=6207710 Score = 86.0 bits (94), Expect = 6e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 |||||||||||| || ||| || ||||| | |||||||| ||||| || ||||||| Sbjct 3956772 GATGAACCACTTCTGAGAGAAAACCCCCGCCGCTTTGTCATCTTTCCTATCGAATATCAT 3956831 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTA 57623 || |||||| | ||||| || || || || || || |||||||| | || || ||| Sbjct 3956832 GATATTTGGCAAATGTATAAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAGGAGGTA 3956888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445692101885280