Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq738 167 3e-36 >seq738 Length=1970462 Score = 167 bits (184), Expect = 3e-36 Identities = 465/706 (66%), Gaps = 13/706 (2%) Strand=Plus/Plus Query 69926 AAGGGCGTCATCGAGGAGCTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCTG 69985 ||||| || | ||||| | ||||| | || ||||| || || || || |||||| Sbjct 1172594 AAGGGTGTTTTGGAGGAATTGCTGTGGTTTATCAAGGGATCCACAAACGCTAAGGAGCTG 1172653 Query 69986 AGCCGAAAGGGTGTACACATTTGGAGCGGCAACAGTAGTCGAAGCGTTTTGGATTCGCTC 70045 ||||| || | || ||| || ||| | ||| |||| ||||| || Sbjct 1172654 TCTTCCAAGGGAGTGAAAATCTGGGACGCCAATGGGTCCCGAGGCGTCTTGGACAGCCTG 1172713 Query 70046 GGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCAC 70105 || ||| || |||| ||| | ||||| || ||||| ||| | || ||||||||||| Sbjct 1172714 GGATTCTCCACCAGAGAAG---GAGATCTAGGCCCAGTATACCGCTTTCAGTGGAGGCAT 1172770 Query 70106 TCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTG 70165 | || || | || | ||| || |||| ||||| || | || || || ||| || Sbjct 1172771 TTTGGGGCCGAATACGAAGATACGGATTCAGATTATTCAGGCAAAGGAGTAGACCAACTG 1172830 Query 70166 CAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCA 70225 |||| | | |||||| |||| ||||| || | || || || ||| | ||||| | Sbjct 1172831 CAGAAGGTGACTGACACAATCAAAACCAACCCTAATGACAGAAGAATCATCATGTGTGCC 1172890 Query 70226 TGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGT--TTGGCTCAGT 70283 |||||||| | | | | | | ||| || ||||| || || || || || |||| Sbjct 1172891 TGGAATCCAAAACACCTCCCGCTCACGGCCCTCCCACCCTGCCA-TGCCCTTTGC-CAGT 1172948 Query 70284 TTTAC-TCGT--ACGATGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGG 70340 | ||| | || ||| || | |||| ||| ||||| || || | ||||||| Sbjct 1172949 TCTACGTGGTGAACGGTG---AGCTGTCCTGCCAGCTGTATGAGCGGTCAGGAGACATGG 1173005 Query 70341 GCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACA 70400 |||| || || ||||| ||||| || ||||| ||| || | || |||||||||| |||| Sbjct 1173006 GCCTGGGCGTGCCCTTCAACATCGCCAGCTACTCTCTGCTCACCTACATGATTGCACACA 1173065 Query 70401 TTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAA 70460 | || |||||||| | || | |||||||| | || || || ||| | || | | Sbjct 1173066 TCACAGGCCTGAAGCCAGGTGACCTTGTACACACTTTGGGAGATGCACACATTTACCTGA 1173125 Query 70461 ATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGG 70520 |||||| |||||| | || |||| || || || || || ||||| || ||||| Sbjct 1173126 ATCACACTGAGCCACTGAAAATGCAGCTTCCGCGAGAACCAAGGCCTTTCCCGAAGCTCA 1173185 Query 70521 AGTTTGCTCGTAAAGTTGAAAATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAG 70580 | | ||| |||||||| || | ||| | || ||| ||||| ||| || ||| Sbjct 1173186 AAATGCTTCGAAAAGTTGAGAAAACTGATGGCTTCAAGGCTGAAGACTTTCAGATTGAAG 1173245 Query 70581 GTTACGATCCATACCCTAAGATTCCCATGGTTCTGGCTGTTTAGAG 70626 | ||| |||| | || | ||| |||| |||||||||| || Sbjct 1173246 GCTACAATCCTCATCCGACTATTAAAATGGAAATGGCTGTTTAAAG 1173291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740935683957840